Pairwise Alignments

Query, 258 a.a., Lipopolysaccharide export system ATP-binding protein LptB from Xanthobacter sp. DMC5

Subject, 296 a.a., ABC transporter, nucleotide binding/ATPase protein from Agrobacterium fabrum C58

 Score =  146 bits (369), Expect = 4e-40
 Identities = 90/264 (34%), Positives = 145/264 (54%), Gaps = 11/264 (4%)

Query: 2   STAPDVALEARDIGLKFGTFVALEGVTVTFQRGGITGIVGPNGAGKSTLFNVLGGQLRAD 61
           +T  D  L+   + +KFG  +A+   +   +RG IT ++GPNGAGK+T+FN + G  +  
Sbjct: 15  NTTGDTILKVEHLSMKFGGLMAINDFSFEAKRGEITALIGPNGAGKTTVFNCITGFYKPT 74

Query: 62  TGAVLLHGQD----ISRSAP--HIRARHGLTRTFQISRELGALTVLENLLLASP----RQ 111
            G + +  Q+    +    P   I  +  + RTFQ  R    LTVLENLL+A      + 
Sbjct: 75  MGMITMRQQNGEAHLLERLPDFEITKKAKVARTFQNIRLFSGLTVLENLLVAQHNALMKA 134

Query: 112 PGEGVLAALRGGASVRQAEDEAISRARALLERVSLWRLADSPANALSGGQKKLLELCRAL 171
            G  +L  L G  + ++A   +I +A+  LE+  L   AD PA  L  G ++ LE+ RA+
Sbjct: 135 SGYTILGLL-GLPAYKRAVASSIEKAKYWLEKADLVDRADDPAGDLPYGAQRRLEIARAM 193

Query: 172 MLKPRIVLLDEPAAGVNPVLVGELGDFIRTLRDEGLSFGIVEHNMDLIAALCDPIHVLAE 231
              P ++ LDEPAAG+NP     L   +R++RDEG S  ++EH+M ++  + D + VL  
Sbjct: 194 CTGPELLCLDEPAAGLNPKESLALNTLLRSIRDEGTSLLLIEHDMSVVMQISDHVVVLEY 253

Query: 232 GRLLTSGTFAEISSNARVTEAYLG 255
           G+ ++ G+   + ++ +V  AYLG
Sbjct: 254 GQKISDGSPDHVKNDPKVIAAYLG 277