Pairwise Alignments

Query, 286 a.a., High-affinity branched-chain amino acid transport system permease protein LivH from Xanthobacter sp. DMC5

Subject, 304 a.a., branched-chain amino acid transporter permease subunit LivH from Pseudomonas simiae WCS417

 Score =  141 bits (356), Expect = 2e-38
 Identities = 87/297 (29%), Positives = 161/297 (54%), Gaps = 13/297 (4%)

Query: 3   QLIFNGLVTGLLIALPALSLALVFSVLRFANYAIGAMLTVGAYLV---YGFNAGLGLP-- 57
           Q + NGL  G +  L A+   +V+ ++   N+A G +  + AYL        A  G+   
Sbjct: 7   QQLVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLAAISLALLAYFGIESF 66

Query: 58  --LPIAALAGSLAAAGL-ALVINRLVYDRLRDRGGVTLLVASIGVGIALENAVRFIAGSS 114
             L +  L  ++   G+   VI R+ Y  LR+   +  L+++IG+ + L+N  +   G+ 
Sbjct: 67  PLLILGTLIFTVVVTGVYGWVIERVAYKPLRNSTRLAPLISAIGISLILQNYAQIAQGAK 126

Query: 115 TRGFQVDVARPVRL----WGLRINHEQIVTIITVLVALTLVWVIFRYTRLGRAMRAVADN 170
            +G    +A   R+      +++ + ++  ++     + L+  + +YT+LGR  RA   +
Sbjct: 127 QQGIPTLLAGAWRVDIGSGFVQLTYTKVFILVAAFAGMALLTYVIKYTKLGRMCRATQQD 186

Query: 171 ADLAAVRGVPRGQVVTVVWVLSAVLATLAGVLVGLD-GNVDPQMGWNYVLPVFTAAILGG 229
             +A++ G+   +V++ V+V+ A +A LAGVL+ L+ G  D   G+   +  FTAA+LGG
Sbjct: 187 RKMASILGINTDRVISYVFVIGAAMAALAGVLITLNYGTFDFYAGFIIGIKAFTAAVLGG 246

Query: 230 IGNPMAAVAGAVLLGITEELATLVLAPHYRTMVAFAVMALILLFRPTGLFGVPGGAK 286
           IG+   A+ G ++LGI+E L + ++   Y+ + +F+++ +IL+FRP GL G P  AK
Sbjct: 247 IGSLPGAMLGGIILGISESLFSGLINSDYKDVFSFSLLVVILIFRPQGLLGRPLVAK 303