Pairwise Alignments

Query, 286 a.a., High-affinity branched-chain amino acid transport system permease protein LivH from Xanthobacter sp. DMC5

Subject, 291 a.a., branched-chain amino acid ABC transporter permease from Magnetospirillum magneticum AMB-1

 Score =  126 bits (317), Expect = 5e-34
 Identities = 92/283 (32%), Positives = 145/283 (51%), Gaps = 9/283 (3%)

Query: 3   QLIFNGLVTGLLIALPALSLALVFSVLRFANYAIGAMLTVGAYLVYGFNAGLGLPLPIAA 62
           Q +F+G+++G   AL AL LALVF  +R  N A G ++ +GAY+ Y     LGL  P+A+
Sbjct: 7   QSLFSGVLSGAYYALIALGLALVFGTMRVINLAHGELVLLGAYISYTAEEKLGLD-PLAS 65

Query: 63  LAGSLAAA-GLALVINRLVYDRLRDRGGVTLLVASIGVGIALENAVRFIAG----SSTRG 117
           L  +LA   G A+++  LV    +DR  +  L+ + G+G+ L NAV  I      S+T  
Sbjct: 66  LPLALAVVVGTAILVYYLVSLIKKDRE-LNSLILTFGIGVILTNAVLMIWSADIHSATTP 124

Query: 118 FQVDVARPVRLWGLRINHEQIVTIITVLVALTLVWVIFRYTRLGRAMRAVADNADLAAVR 177
           +  D    +    L     ++V     +  +  VW     +  GRA+RAVA N D A + 
Sbjct: 125 WYHDAT--ILFDTLFAMQAELVFAGFGIALVGAVWWWLEKSWYGRALRAVASNRDAAKLM 182

Query: 178 GVPRGQVVTVVWVLSAVLATLAGVLVGLDGNVDPQMGWNYVLPVFTAAILGGIGNPMAAV 237
           GV       + + +S VLAT+AG+ +     + P MG +  +  F   +L G+G+    +
Sbjct: 183 GVNPQLTEILSFAVSGVLATVAGIAIYTAKVIQPAMGHHLTVKAFIITVLAGMGSVPGVL 242

Query: 238 AGAVLLGITEELATLVLAPHYRTMVAFAVMALILLFRPTGLFG 280
            GAVLLGI E L   + +   + +    +  ++LL  P+GLFG
Sbjct: 243 LGAVLLGIVESLTVTMASSALQELAGMVLFLVVLLLMPSGLFG 285