Pairwise Alignments

Query, 343 a.a., Holliday junction ATP-dependent DNA helicase RuvB from Xanthobacter sp. DMC5

Subject, 334 a.a., Holliday junction branch migration DNA helicase RuvB from Erwinia tracheiphila SCR3

 Score =  404 bits (1038), Expect = e-117
 Identities = 201/326 (61%), Positives = 259/326 (79%), Gaps = 1/326 (0%)

Query: 4   RLLS-GEKRGDDAADSTLRPQLLSEFVGQAQARANLEIFIKAARARGEALDHVLFVGPPG 62
           RL+S G    ++  D  +RP++L+E+VGQ+  R  ++IFI+AA+ RG+ALDH+L  GPPG
Sbjct: 6   RLVSPGTISEEEVIDRAIRPKMLAEYVGQSVVREQMDIFIRAAKMRGDALDHLLIFGPPG 65

Query: 63  LGKTTLAQIMSREMGVGFRSTSGPVIAKAGDLAAILTNLEERDVLFIDEIHRLSPAVEEI 122
           LGKTTLA I++ EMGV  R+TSGPV+ KAGDLAA+LTNLE  DVLFIDEIHRLSP VEE+
Sbjct: 66  LGKTTLANIVANEMGVNLRTTSGPVLEKAGDLAAMLTNLEPHDVLFIDEIHRLSPIVEEM 125

Query: 123 LYPAMEDYELDLVIGEGPAARSVKISLPKFTLVGATTRSGLLTTPLRDRFGIPVRLQFYT 182
           LYPAMEDY+LD++IG+GPAARS+K+ LP FTL+GATTR+G LT+PLRDRFGI  RL+FY 
Sbjct: 126 LYPAMEDYQLDIMIGDGPAARSIKLDLPPFTLIGATTRAGSLTSPLRDRFGIVQRLEFYK 185

Query: 183 VEELEKIVVRGARVMGIAIAPDGATEIARRARGTPRIAGRLLRRVRDFALVAEAERIDRK 242
           VE+L+ IV R A  +G++++ +GA EIARR+RGTPRIA RLLRRVRDF+ V  A  +  +
Sbjct: 186 VEDLQHIVARSATCLGLSLSTEGALEIARRSRGTPRIANRLLRRVRDFSEVRAAGDLSGE 245

Query: 243 IADRALLALEVDAAGLDAMDRRYLTVIAEFYGGGPVGVDTLAAALSEPRDAIEEIVEPFL 302
           +A RAL  L VD  G D MDR+ L  I + + GGPVG+D LAAA+ E R+ IE+++EP+L
Sbjct: 246 VAARALDMLNVDTEGFDYMDRKLLLAIIDKFTGGPVGLDNLAAAIGEERETIEDVLEPYL 305

Query: 303 VQQGFIQRTPRGRMLTGAAFRHLGLA 328
           +QQGFIQRTPRGR+ T  A+RH GL+
Sbjct: 306 IQQGFIQRTPRGRIATQHAWRHFGLS 331