Pairwise Alignments

Query, 299 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 339 a.a., Branched-chain amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  110 bits (274), Expect = 6e-29
 Identities = 94/297 (31%), Positives = 148/297 (49%), Gaps = 27/297 (9%)

Query: 1   MTSYLFATLILVAIATIAALALNLQWGLGGLVNFGLFGFYMLGAYVCALLDVN---GVPP 57
           + S   AT IL  I  +AALA NL  G  GL++FG   F+ +GAY  ALL ++   G+  
Sbjct: 32  LPSATLATEIL--IFAMAALACNLLLGYTGLLSFGQGIFFGVGAYGAALLMIHLQWGM-- 87

Query: 58  LAAMAAAVAVTAVASALVSLISIRLSEDYLAIVTLGFAECLRLFISY--EDWLTRGTLGV 115
            AA+  A    A  + LV  ++IR +  Y  ++TL F++ +  F++Y    W T G  G+
Sbjct: 88  FAALLGAAVFGAFLALLVGALAIRRTGIYFVMLTLAFSQ-MAYFLAYTLSGW-TGGDNGL 145

Query: 116 PGIVRPFAQSLGPQWSDAVFLAFAYACLASSFLLL----RRITRAPFGRLVRATRDDPTV 171
             + RP  +  G    D       Y  +A  FLL+     R+ R+PFG  + A R++ T 
Sbjct: 146 LDVPRPNIEIAGHVLVDLADPRHFYVFVAVLFLLIFAAALRVIRSPFGSTLLAIRENETR 205

Query: 172 AEALGKNVLALRAKVFAIGGALLGVAGSLHAFYYTYIDPSQFGTTLTAYAFMAVIIGGRG 231
           A A+G +    +  VF + GA+ G+AG+L+A    +   S     ++    +  I+GG G
Sbjct: 206 AAAIGYDTRHFKILVFMLSGAITGIAGALYAMLLHFAPLSNIDLMMSENILIMTIVGGTG 265

Query: 232 SHIGVLVAGFTVILLLEGSRFLSDVIPFLDGGQLAALRLMLVGVSLIAILIYRPEGL 288
           S  G L+    ++L       L DV+      +L    LML+GV LI ++++   GL
Sbjct: 266 SLFGSLLGAGAIVL-------LGDVL-----SELWPRWLMLLGVILILVVVFMRGGL 310