Pairwise Alignments

Query, 330 a.a., tRNA-dihydrouridine(20/20a) synthase from Xanthobacter sp. DMC5

Subject, 337 a.a., tRNA-dihydrouridine synthase B from Pseudomonas putida KT2440

 Score = 90.5 bits (223), Expect = 5e-23
 Identities = 82/299 (27%), Positives = 138/299 (46%), Gaps = 37/299 (12%)

Query: 11  VAPMMDWTDRHCRVFHRTFSRHALLYTEMVTAPAVIHGDRA---RLLGFSDAEHPVAVQL 67
           +APM   TD+  R   +      ++ +EMV++   +   R    R +   D E P +VQ+
Sbjct: 17  LAPMAGVTDQPFRTLCQRLGA-GMVVSEMVSSDMSLWNSRKSSLRRIHEGDPE-PRSVQI 74

Query: 68  GGSDPALLAQAARICADFGYDEINLNVGCPSDRVQGGNFGACLMREPQVVADCVAAMKSA 127
            G D  ++A AA+   + G   I++N+GCP+ +V     G+ L+R+  +V++ + A+ SA
Sbjct: 75  AGGDAQMMAAAAKANVEAGAQIIDINMGCPAKKVCNKAAGSALLRDEALVSEILHAVVSA 134

Query: 128 VALPVTVKCRIGVDDQDPEEALDTLADAVLAAGCDGLIVHARKAWLNGLSPRENRDIPPL 187
           V +PVT+K R G D  +       +A     AG   L VH R         R +      
Sbjct: 135 VDVPVTLKIRTGWDRANKNGL--NVAKIAEQAGIQALAVHGR--------TRADLYTGEA 184

Query: 188 DYDRVRRLKARLPHVRVALNGGLES--LAQGLAEADGLDGIMFGRAAYHTPELLAEVDPT 245
           +YD +  +K  +  + V  NG + S   A+ + E  G+DG++ GRAA   P +  E++  
Sbjct: 185 EYDTIGAIKQAV-SIPVFANGDITSPEKARAVLETTGVDGLLIGRAAQGRPWIFREIEHY 243

Query: 246 L---HGVPAPHEDTFAVIEAFEPYIARHLEAGGRLSDITRHMLGLFGGKKGARIFRRRL 301
           L     +PAP       ++  E  +  HL A          +   +G   G RI R+ +
Sbjct: 244 LRTGEHLPAPQ------LDEVERILLEHLAA----------LHAFYGDVMGVRIARKHV 286