Pairwise Alignments

Query, 919 a.a., DNA gyrase subunit A from Xanthobacter sp. DMC5

Subject, 878 a.a., DNA gyrase subunit A (EC 5.99.1.3) from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score =  873 bits (2256), Expect = 0.0
 Identities = 469/916 (51%), Positives = 623/916 (68%), Gaps = 68/916 (7%)

Query: 16  DIRPVSITEELSRSYLDYAMSVIVARALPDVRDGLKPVHRRILFSMHENGYEWNKQYRKS 75
           +I PV+I EEL  SYLDYAMSVIV RALPDVRDGLKPVHRR+L++M+  G +WNK Y+KS
Sbjct: 7   EITPVNIEEELKSSYLDYAMSVIVGRALPDVRDGLKPVHRRVLYAMNVLGNDWNKAYKKS 66

Query: 76  ARVVGDVIGKYHPHGDQSVYDALVRMAQTFAMRVPLVDGQGNFGSVDGDAPAAMRYTEVR 135
           ARVVGDVIGKYHPHGD +VYD +VRMAQ F++R  LVDGQGNFGS+DGD+ AAMRYTE+R
Sbjct: 67  ARVVGDVIGKYHPHGDSAVYDTIVRMAQPFSLRYMLVDGQGNFGSIDGDSAAAMRYTEIR 126

Query: 136 LEKVTNTLLDDLDKETVDFQDNYDNSEHEPTVLPAKFPNLLVNGAGGIAVGMATNIPPHN 195
           L K+ + L+ DL+KETVDF DNYD +E  P V+P K PNLLVNG+ GIAVGMATNIPPHN
Sbjct: 127 LAKIAHELMADLEKETVDFVDNYDGTEKIPDVMPTKIPNLLVNGSSGIAVGMATNIPPHN 186

Query: 196 LGEIIDVTVALLDDPLLEPEALLDLLPGPDFPTGALILGRTGIRQAYLTGRGSILMRAKV 255
           L E+I+  +A +D+  +  E L++ +PGPDFPT A+I GR GI +AY TGRG + +RA+ 
Sbjct: 187 LTEVINGCLAYIDNEDISIEGLMEHIPGPDFPTAAIINGRRGIEEAYRTGRGKVYIRARA 246

Query: 256 AIE-HIRKDREALIVTEIPYQVNKATMIEKIAELVRDKRVEGISEIRDESDRDGMRVVIE 314
            +E   +  RE +IV EIPYQVNKA +IEKIAELV+DKRVEGIS +RDESD+DGMR+VIE
Sbjct: 247 EVEADAKTGRETIIVHEIPYQVNKARLIEKIAELVKDKRVEGISALRDESDKDGMRIVIE 306

Query: 315 IKRDAQADVVLNNLYRLTLLQTSFGVNMVALSGGKPGILTLHDVLTAFIAFREEVISRRT 374
           +KRDA  +VVLNNLY  T LQ SFG+NMVAL  G+P I+ L D+++AF+  R EV++RRT
Sbjct: 307 VKRDAVGEVVLNNLYSQTQLQVSFGINMVALHHGQPKIMNLKDIISAFVRHRREVVTRRT 366

Query: 375 KFLLRKARDRAHVLVGLAIAVANIDEVIRLIRTAPDPATARESLMGRDWPAKDMAPLIAL 434
            F LRKARDRAH+L  LAIA+ANID +I LIR AP PA A+ +L+ R W   ++A ++  
Sbjct: 367 IFELRKARDRAHILEALAIALANIDPIIELIRRAPTPAEAKAALISRPWDLGNVAAMLER 426

Query: 435 IADPRHKLK--------EDGTYRLSEVQARAILDLRLQRLTALGRDEIAEELDKLAAEIA 486
             D   + +         DG Y L+E QA+AILDLRLQ+LT L  +++ +E  +L  +IA
Sbjct: 427 AGDDAARPEWLEPEFGVRDGQYYLTEQQAQAILDLRLQKLTGLEHEKLLDEYKELLEQIA 486

Query: 487 DYLEILASRPRMRAIIRDELLAIKAEFGTPRRTEIVEGFGDLEDEDLIQREEMVVTVSHA 546
           + L IL S  R+  +IR+E+  I+ +FG  RRTEI     D+  EDLI +E++VVT+SH 
Sbjct: 487 ELLHILGSADRLMEVIREEMELIRDQFGDERRTEITANSADINIEDLISQEDVVVTLSHQ 546

Query: 547 GYIKRVPLSTYRAQRRGGKGRSAMQTRDEDFVTRLFVASTHAPVLFFSSKGQVYKMKVWR 606
           GY+K  PL+ Y AQRRGGKG+SA + ++EDF+ RL VA+TH  +L FSS+G++Y MKV++
Sbjct: 547 GYVKYQPLTDYEAQRRGGKGKSAARIKEEDFIDRLLVANTHDTILCFSSRGRLYWMKVYQ 606

Query: 607 LPLAAPQARGKALINILPLEQDERITSVVLLPE-DEGENQRLQIMFATTGGTVRRNALTD 665
           LP A+  ARG+ ++N+LPLE +ERIT+++ + E +EG N    +  AT  GTV++ ALT+
Sbjct: 607 LPEASRGARGRPIVNLLPLEANERITAILPVREYEEGVN----VFMATASGTVKKTALTE 662

Query: 666 FQQVNRNGKIAMKLAEGEAIADVGLCTEEDDVLLTTAAGACIRFPVTEVRLFKGRDSVGV 725
           F +    G IA+ L +G+ +  V L +  D+V+L +AAG  +RF    VR   GR + GV
Sbjct: 663 FSRPRSAGIIAVNLNDGDELIGVDLTSGSDEVMLFSAAGKVVRFKEDAVRAM-GRTATGV 721

Query: 726 RGIRLEESDSVISMAIIRHVEADAEQRLAYIKMRRALRGEAGESAEVEQEEGASGSGQLS 785
           RGI+L   D V+S+ I R                       GE A               
Sbjct: 722 RGIKLAGDDKVVSLIIPR-----------------------GEGA--------------- 743

Query: 786 QERYAEMGAKEQFILTVSENGYGKRTSSYEYRVTGRGGKGIVAMAVNERNGRLVASFPVE 845
                        ILTV++NGYGKRT++ EY    R  +G++++ V ERNG +V +  V+
Sbjct: 744 -------------ILTVTQNGYGKRTAADEYPTKSRATQGVISIKVTERNGSVVGAVQVD 790

Query: 846 DADQIMLVTDGGQLIRCPVDGIRIVGRASQGVIVFDTAEGERVVSVEHISEDTGAEGEAG 905
           D DQIM++TD G L+R  V  I +VGR +QGVI+  TAE E VV ++ ++E    E    
Sbjct: 791 DCDQIMMITDAGTLVRTRVSEISVVGRNTQGVILIRTAEDENVVGLQRVAEPVDDEELDA 850

Query: 906 ESGVDAPGDD--TPEA 919
             G  A GD+   PEA
Sbjct: 851 IDGSVAEGDEDIAPEA 866