Pairwise Alignments

Query, 919 a.a., DNA gyrase subunit A from Xanthobacter sp. DMC5

Subject, 842 a.a., DNA gyrase, A subunit from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  726 bits (1875), Expect = 0.0
 Identities = 390/884 (44%), Positives = 550/884 (62%), Gaps = 80/884 (9%)

Query: 16  DIRPVSITEELSRSYLDYAMSVIVARALPDVRDGLKPVHRRILFSMHENGYEWNKQYRKS 75
           +I P++I EE+  +Y+DY+MSVIV+RALPDVRDG+KPVHRRILF M E G   NK Y+KS
Sbjct: 8   NIIPINIEEEMRGAYIDYSMSVIVSRALPDVRDGMKPVHRRILFGMQELGVLHNKPYKKS 67

Query: 76  ARVVGDVIGKYHPHGDQSVYDALVRMAQTFAMRVPLVDGQGNFGSVDGDAPAAMRYTEVR 135
           AR+VG+V+GKYHPHGD +VY+ +VRMAQ +++R PLVD QGNFGS+DGD  AAMRYTE R
Sbjct: 68  ARIVGEVLGKYHPHGDSAVYETMVRMAQDWSLRYPLVDPQGNFGSIDGDNAAAMRYTEAR 127

Query: 136 LEKVTNTLLDDLDKETVDFQDNYDNSEHEPTVLPAKFPNLLVNGAGGIAVGMATNIPPHN 195
           L+++   LL D++KETVDFQ N+D+S  EP VLPAK P LL+NGA GIAVGMATN+ PH 
Sbjct: 128 LKRIAEELLTDINKETVDFQLNFDDSLKEPVVLPAKIPALLLNGASGIAVGMATNMAPHQ 187

Query: 196 LGEIIDVTVALLDDPLLEPEALLDLLPGPDFPTGALILGRTGIRQAYLTGRGSILMRAKV 255
           LGE+ID T+A +++  +  E L+  +  PDFPTG +I G  G++ AY TGRG ++MR K 
Sbjct: 188 LGEVIDGTIAYIENNDITVEELMKHVIAPDFPTGGIIYGYNGVKSAYETGRGRVVMRGKA 247

Query: 256 AIEHIRKDREALIVTEIPYQVNKATMIEKIAELVRDKRVEGISEIRDESDRDGMRVVIEI 315
            IE     +E +I+ EIPY VNKA MIEK A+L+++K++EGIS IRDESDR GMR+V E+
Sbjct: 248 TIETKDTGKEMIIINEIPYLVNKANMIEKTAQLIQEKKLEGISAIRDESDRRGMRIVYEL 307

Query: 316 KRDAQADVVLNNLYRLTLLQTSFGVNMVALSGGKPGILTLHDVLTAFIAFREEVISRRTK 375
           KRDA A+VVLNNLY+ T LQTSF +N VAL  G+P  L L +++  ++  R EV++RRT+
Sbjct: 308 KRDAIANVVLNNLYKQTQLQTSFSINNVALVKGRPYTLNLKELIVHYVNHRHEVVTRRTE 367

Query: 376 FLLRKARDRAHVLVGLAIAVANIDEVIRLIRTAPDPATARESLMGRDWPAKDMAPLIALI 435
           + LR+A  RAH+L G  IA+ N+DEVI LIR + DP TAR  LM +              
Sbjct: 368 YELREAEKRAHILQGYLIALDNLDEVISLIRNSRDPETARTGLMEK-------------- 413

Query: 436 ADPRHKLKEDGTYRLSEVQARAILDLRLQRLTALGRDEIAEELDKLAAEIADYLEILASR 495
                       + L+E+QARAILD+RLQRLT + R++I +E ++L   I D  +IL  +
Sbjct: 414 ------------FELTEIQARAILDMRLQRLTGMEREKIQKEYEELMLLIEDLKDILEKK 461

Query: 496 PRMRAIIRDELLAIKAEFGTPRRTEIVEGFGDLEDEDLIQREEMVVTVSHAGYIKRVPLS 555
            R   II+ EL  IK  +   RRT I     D   ED+I  EE+++TVSH GY+KR  L 
Sbjct: 462 ERRMEIIKTELSEIKERYNDERRTTIEHNAEDFSYEDMIPNEEVIITVSHQGYVKRTALK 521

Query: 556 TYRAQRRGGKGRSAMQTRDEDFVTRLFVASTHAPVLFFSSKGQVYKMKVWRLPLAAPQAR 615
            YR Q RGG G   + T+D+D+   LF ASTH  +L F+ KG+++ +K + +P  +  ++
Sbjct: 522 EYRTQGRGGVGSRGVSTKDDDYTEYLFSASTHNYLLIFTDKGKLFWLKTYAIPEGSKTSK 581

Query: 616 GKALINILPLEQDERITSVVLLPE--DEGENQRLQIMFATTGGTVRRNALTDFQQVNRNG 673
           G+ + N++ +E D++I S++ + +  DE   Q   ++  T  G +++  L  + +   NG
Sbjct: 582 GRPIQNLINIESDDKIRSIIQVTDLNDEDYIQNNFLVMVTKNGVIKKTTLEQYSRPRSNG 641

Query: 674 KIAMKLAEGEAIADVGLCTEEDDVLLTTAAGACIRFPVTEVRLFKGRDSVGVRGIRL-EE 732
            IA+ + E + + +V     +  +L+   +G  I F  + VR   GR + GV+ I L ++
Sbjct: 642 IIALNIREDDQLLNVEFTHGDSHILIAAKSGRAIHFHESAVRPM-GRTATGVKAITLSDD 700

Query: 733 SDSVISMAIIRHVEADAEQRLAYIKMRRALRGEAGESAEVEQEEGASGSGQLSQERYAEM 792
            D V+ M  +   EA                                             
Sbjct: 701 KDEVVGMVCVNREEAT-------------------------------------------- 716

Query: 793 GAKEQFILTVSENGYGKRTSSYEYRVTGRGGKGIVAMAVNERNGRLVASFPVEDADQIML 852
                 +L VSE GYGKR++  EYR+T RGGKG+ AM V ++ G LVA   V D+D +M+
Sbjct: 717 ------LLVVSEKGYGKRSAVEEYRITNRGGKGVKAMNVTDKTGSLVAIKSVIDSDDLMI 770

Query: 853 VTDGGQLIRCPVDGIRIVGRASQGVIVFDTAEGERVVSVEHISE 896
           +   G +IR PV G+RI+GRA+QGV +    E + + SV  + +
Sbjct: 771 INKSGIIIRTPVSGLRIMGRATQGVRLIKLNENDEISSVAKVEQ 814



 Score = 70.1 bits (170), Expect = 6e-16
 Identities = 60/230 (26%), Positives = 110/230 (47%), Gaps = 18/230 (7%)

Query: 527 DLEDEDLIQREEMVVTVSHAGYIKRVPLSTYRAQRRGGKGRSAMQTRDEDFVTRLFVAST 586
           DL DED IQ   +V+ V+  G IK+  L  Y   R    G  A+  R++D +  +     
Sbjct: 605 DLNDEDYIQNNFLVM-VTKNGVIKKTTLEQYSRPR--SNGIIALNIREDDQLLNVEFTHG 661

Query: 587 HAPVLFFSSKGQVYKMKVWRLPLAAPQARGKALINILPLEQD-ERITSVVLLPEDEGENQ 645
            + +L  +  G+      +      P  R    +  + L  D + +  +V +  +E    
Sbjct: 662 DSHILIAAKSGRAIH---FHESAVRPMGRTATGVKAITLSDDKDEVVGMVCVNREEAT-- 716

Query: 646 RLQIMFATTGGTVRRNALTDFQQVNRNGK--IAMKLAE--GEAIADVGLCTEEDDVLLTT 701
              ++  +  G  +R+A+ +++  NR GK   AM + +  G  +A +    + DD+++  
Sbjct: 717 ---LLVVSEKGYGKRSAVEEYRITNRGGKGVKAMNVTDKTGSLVA-IKSVIDSDDLMIIN 772

Query: 702 AAGACIRFPVTEVRLFKGRDSVGVRGIRLEESDSVISMAIIRHVEADAEQ 751
            +G  IR PV+ +R+  GR + GVR I+L E+D + S+A +  VE + E+
Sbjct: 773 KSGIIIRTPVSGLRIM-GRATQGVRLIKLNENDEISSVAKVEQVEEEIEE 821