Pairwise Alignments

Query, 491 a.a., putative cyclic di-GMP phosphodiesterase PdeB from Xanthobacter sp. DMC5

Subject, 555 a.a., GGDEF domain protein from Pseudomonas putida KT2440

 Score =  164 bits (414), Expect = 1e-44
 Identities = 93/245 (37%), Positives = 140/245 (57%), Gaps = 2/245 (0%)

Query: 243 TELAKALKKGELVAHYQPIIELATGRCIGAEALVRWPRADGSQTPPDMFIPLAEETGLIG 302
           +EL +AL++ EL  HYQP + LA GR +G EALVRW  A+    PP  F+PLAE++GLI 
Sbjct: 298 SELRRALRRDELELHYQPRLNLADGRIVGLEALVRWRHAERGLLPPSEFVPLAEQSGLIV 357

Query: 303 RLTDQMLSAVIEDLGDLL-RDDPHAHVSINLSAVDITTGRILPVLERVLDGSGIQPRQIW 361
            L   ++S  + D+  L  R     H+++NLS       ++L  L R++   G+  R + 
Sbjct: 358 PLGYWVISRALRDMQALCERGLEPLHMAVNLSFRQFQDSQLLATLSRLILEHGVDARWLE 417

Query: 362 LEATERSFIDVDGA-RATLLELRRRGHRTAIDDFGTGYSGLNYIQNLPIDLLKIDRSFIT 420
            E TE + +  +   R T+  L R G R ++DDFGTG+S   ++ +LPI LLK+DRSF+ 
Sbjct: 418 FELTETAVMRRNEVVRQTMDALGRLGVRFSLDDFGTGFSSFVHLNSLPITLLKVDRSFVA 477

Query: 421 AVNTEAPTRDVTPYIIAMGHELKLQIIAEGVETENQAEYLRTQGVSFAQGWLYSKALPAS 480
            +      R +   +I + H L L+++AEGVE+E Q   LR  G    QG+L S+ LP  
Sbjct: 478 EMEMREENRKLVHAMINLAHNLNLEVVAEGVESEEQLTLLRGFGCDQVQGFLVSRPLPIG 537

Query: 481 AFLVF 485
             + +
Sbjct: 538 ELMAY 542