Pairwise Alignments

Query, 491 a.a., putative cyclic di-GMP phosphodiesterase PdeB from Xanthobacter sp. DMC5

Subject, 733 a.a., Sensory box protein/GGDEF domain protein from Pseudomonas putida KT2440

 Score =  155 bits (393), Expect = 3e-42
 Identities = 93/248 (37%), Positives = 137/248 (55%), Gaps = 2/248 (0%)

Query: 240 SPRTELAKALKKGELVAHYQPIIELATGRCIGAEALVRWPRADGSQTPPDMFIPLAEETG 299
           S R +L KA+K      HYQP IE  T R +G EAL+RW         P +FIP+AE++G
Sbjct: 483 SLRNDLQKAIKTQSFSLHYQPQIEARTRRVVGIEALLRWEHPVRGFISPAVFIPVAEDSG 542

Query: 300 LIGRLTDQMLSAVIEDLGDLLRDDPHA-HVSINLSAVDITTGRILPVLERVLDGSGIQPR 358
            I  L+  +L      L DL     +   +++N+S +    G+ +  ++ VL   G+   
Sbjct: 543 QIIPLSLWVLDTACAQLRDLCDQGFNGISMAVNISPMHFQCGQFVECIQAVLSKHGLSAG 602

Query: 359 QIWLEATERSFI-DVDGARATLLELRRRGHRTAIDDFGTGYSGLNYIQNLPIDLLKIDRS 417
           Q+ LE TE   + +V+ A ATL  L+  G R A+DDFGTG+S L+Y++ LPID +KIDRS
Sbjct: 603 QLELEITESLLLHNVEQAIATLHRLKDLGVRIALDDFGTGFSSLSYLKCLPIDKIKIDRS 662

Query: 418 FITAVNTEAPTRDVTPYIIAMGHELKLQIIAEGVETENQAEYLRTQGVSFAQGWLYSKAL 477
           FI  ++T      +T  II+M H L L ++AEGVET  Q  +L        QG+ +++ +
Sbjct: 663 FIQDISTNPHDAAITQGIISMAHHLSLSVVAEGVETAPQVNFLERGRCDILQGYYFARPM 722

Query: 478 PASAFLVF 485
              A   F
Sbjct: 723 SHEALRTF 730