Pairwise Alignments

Query, 495 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 425 a.a., branched-chain amino acid ABC transporter permease from Pseudomonas simiae WCS417

 Score =  310 bits (794), Expect = 6e-89
 Identities = 202/462 (43%), Positives = 260/462 (56%), Gaps = 65/462 (14%)

Query: 38  DALVSGLLTALLFLPLVGFRASESSTGSLVLTYRFGL----VAIFAGIVMVGRFLLMVTV 93
           D +++GL++ ++F P+VG          ++  Y F L    VA+   IVMVGRF + + +
Sbjct: 15  DTVLAGLISLVVFGPIVGV---------VLDGYSFNLEPARVALLVAIVMVGRFAMSLFL 65

Query: 94  WNPNRPPRRV---STTPGVMVRLGALASPA--VKPVFFSFAILYPFLSILLAGGLSPSRY 148
             P          ST  GV V      S    + P     AI++P  +         ++Y
Sbjct: 66  QTPKGVKILQGFESTGSGVHVLAPDYKSRLRWIIPALIVIAIVFPIFA---------NKY 116

Query: 149 WVDLGIYVLTYVMLGWGLNIVVGLAGLLDLGYVAFYAVGAYTFALLSTSVPINDFFAGTL 208
            + + I  L YV+LG GLNIVVGLAGLLDLGYVAFYA+GAY  AL    + +        
Sbjct: 117 LLTVVILGLIYVLLGLGLNIVVGLAGLLDLGYVAFYAIGAYGLALGYQYLGLG------- 169

Query: 209 GDDFWTAWAFWICLPLSGILAAMWGVILGFPVLRLRGDYLAIVTLAFGEIIRLVLINWVS 268
                    FW  LPL+ I AA+ G ILGFPVLR+ GDYLAIVTL FGEIIRLVL NW+S
Sbjct: 170 ---------FWTVLPLAAIAAALAGCILGFPVLRMHGDYLAIVTLGFGEIIRLVLNNWLS 220

Query: 269 LTNGGAGISSIPPITFFGVPFDSSETG----FASIFGLEFNSMHRMFFLYFVILGLAALT 324
            T G  G+  +P  TF G+ F          F   FG+++N   +  F+Y V+  +    
Sbjct: 221 FTGGPNGMP-VPSPTFLGLEFGKRAKDGGIPFHEFFGIDYNPNIKFLFIYIVLFLVVLAV 279

Query: 325 AVVTIRLRKMPVGRAWEALREDEIACRSLGINTTLTKLTAFATGAMFGGFAGAFFAVRIR 384
             +  RL +MPVGRAWEALREDEIACRS+G+N  L KL+AF  GA   G AG FFA    
Sbjct: 280 LYIKHRLTRMPVGRAWEALREDEIACRSMGLNHVLVKLSAFTIGASTAGLAGVFFASYQG 339

Query: 385 FVSPESFTFMESAVILAIVVLGGMGSQMGVAGAAILLIGGMELLRNLSFLKADFLFGSDF 444
           FV+P SFTF ESA+ILAIVVLGGMGS +GV  AA +L    ELLR+              
Sbjct: 340 FVNPSSFTFFESALILAIVVLGGMGSTVGVVIAAFVLTVAPELLRSF------------- 386

Query: 445 DPSLYRMLIFGFAMVAVMVWRPRGLVSSRMPTIFLKERKAVS 486
             S YR+L+FG  MV +M+WRPRGL+  R+    +  RK V+
Sbjct: 387 --SEYRVLLFGVLMVVMMIWRPRGLI--RISRTGVTPRKGVA 424