Pairwise Alignments

Query, 380 a.a., Putative transport protein YdiK from Xanthobacter sp. DMC5

Subject, 355 a.a., membrane protein from Pseudomonas simiae WCS417

 Score = 85.5 bits (210), Expect = 2e-21
 Identities = 88/351 (25%), Positives = 153/351 (43%), Gaps = 18/351 (5%)

Query: 26  QLALRFGTLALLFGWC----FTIVQPFLTSILWGLIIAIASHPLFIRLCAALNGRTATAA 81
           Q  L+F TL LL G        I+ PF  ++ W +I+ I   P+  RL           +
Sbjct: 3   QTNLQFKTLLLLLGLVTIAFIWILLPFYGAVFWAVILGIIFAPMQRRLQQRFGWNRNLTS 62

Query: 82  TLFVVLALTLLVLPAMLLADTLVNSLKLLAHHMADGTLRLPPPPAAVRGWFLVGEPLYSF 141
              +   L + +LP ++ +  LV     L  ++  G L +      +  +  V  P +  
Sbjct: 63  LATLSACLIIAILPVIITSALLVQEGATLYKNIESGKLDV---AGYIEQFKNVLPPYFQH 119

Query: 142 WM--LASTNLDQAISSVASELTWAGKWMLGSATGVLLGILEFVVAIFVAAVLM-ANATSG 198
            +      NL+     +        ++    A     G  +F+V+ F+   L+      G
Sbjct: 120 LLDRFGMGNLEGLREKIVKSAMQGSQFFATQAFSFGQGTFDFLVSFFIMLYLLYFLLRDG 179

Query: 199 QRIAGDVVTR--LAGSGGLGYADLAVRTIRSVSKGIIGVALIQSLLAGLGFLAADIPAAG 256
             +   V T   LA            R +R+  KG + VA+ Q  L GL F   DIP+A 
Sbjct: 180 PELVRKVRTAVPLAEPQKRRLQLKFNRVVRATVKGNVLVAVTQGALGGLIFWFLDIPSAL 239

Query: 257 LLALLCLIIAIV-QLPLAIVLVPVAIY---AFTLLDPMPAVIFAVWCAGVSLIEHVLRPI 312
           L A+L   ++++  +   IV  PVA Y   +  +   +   +F V+  G  L+++VLRPI
Sbjct: 240 LWAVLMAFLSLLPAVGAGIVWGPVAAYFLLSGAIWQGVVLALFGVFVIG--LVDNVLRPI 297

Query: 313 MLGRGVDVPMLVVFIGAIGGLLSSGVLGLFVGPVVLALGYTLILHWLEAEP 363
           ++G+   +P  ++ I  +GGL   G+ G  +GP+V AL  +    ++E++P
Sbjct: 298 LVGKDTKMPDYLILISTLGGLSVFGLNGFVIGPLVAALFMSSWALFVESKP 348