Pairwise Alignments

Query, 231 a.a., Inner membrane protein YohK from Xanthobacter sp. DMC5

Subject, 238 a.a., putative Membrane protein from Pseudomonas putida KT2440

 Score =  127 bits (320), Expect = 1e-34
 Identities = 79/230 (34%), Positives = 119/230 (51%), Gaps = 6/230 (2%)

Query: 3   MHNPLFATLFWSTVTIGSYLAARAIGRRWRFWWTSPLLLTPIGVGAVALSLHAGYGEYIA 62
           +H+PLF       +T+G+Y    A   + R+ +  P+L++ + V  V L     Y EY  
Sbjct: 13  IHHPLFGI----GITLGAYQVVLAAYEKTRWIFLQPVLVSMLLVIGVLLLCGIDYSEYRK 68

Query: 63  GTRWLLLMMGPATVAFAIPIYEQRALIRR-YWPVLLVGVAVGSTLAMGTALALAHLLGLS 121
            T  + +++GPATVA A+P+Y     IR+ +WP     + VG   A    L L    G  
Sbjct: 69  STEIMNILLGPATVALAVPLYLNLRRIRQLFWPTFTT-LVVGGLFATLCCLVLGWWFGAE 127

Query: 122 DSIGLSLMPRSTSTPFAMAVSSDIGGVPDLTAVFVILTGICGAALGEVVLKVMPLRSSLA 181
             I +++ P+S ++P AM V+  IGGV  L AVFV++TG+ GA  G  +L    + S  A
Sbjct: 128 HMILMTMAPKSVTSPIAMLVAEQIGGVAALAAVFVLITGVIGAIFGPALLSRFGVHSPEA 187

Query: 182 RGALFGMGAHGAGVARAHQIGGEEGSIAGLVMVLAGLFNVMIAPLVAAMV 231
           RG   G+ AH  G + A Q   E G+ A L M L G+   +  PL  ++V
Sbjct: 188 RGMSLGVTAHAVGTSVALQESDECGAFAALAMSLMGVATAVFLPLAVSLV 237