Pairwise Alignments

Query, 343 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 363 a.a., DNA polymerase III subunit delta' from Magnetospirillum magneticum AMB-1

 Score =  216 bits (551), Expect = 6e-61
 Identities = 141/359 (39%), Positives = 192/359 (53%), Gaps = 31/359 (8%)

Query: 13  APHPREQDRLFGHAAVEADLLGDFRAGRLPHALLIGGPEGIGKATLAYRLARVVLAGGPE 72
           +PHPRE   LFGH A E+ LL  + +GRL HA L+ GP+GIGKATLAYR AR  LAGG +
Sbjct: 4   SPHPRETSELFGHGAAESALLDAWNSGRLAHAWLLCGPKGIGKATLAYRFARFALAGGGD 63

Query: 73  PGA------HDLSLSPSHPVFRQVASMSHPDMLVLRRA-PEAGEEKIPTIIPAEMVRRVR 125
            G         L + P HPVFR++AS  H D+  + R   +  + K+ + I  E VR + 
Sbjct: 64  GGGLFGDVPSSLEIRPDHPVFRRIASQGHADLETVERGWADDKKSKLRSEIVVEDVRGIG 123

Query: 126 SFFGATAAAGGWRVCIVDAVDELNAFGANALLKTLEEPPPRALFLLITHAPGKVLATIRS 185
            F   T A GGWRV I+D+ DE+N   ANA+LK LEEPP  AL LLI+H+PG++L TIRS
Sbjct: 124 HFMSLTPAEGGWRVVIIDSADEMNRNAANAVLKVLEEPPRNALMLLISHSPGRLLPTIRS 183

Query: 186 RSRLLRLRALGEGDVLAALDHLSTEIGDLNAAELPAAAQASGGSVRRALTLARGEGMEVR 245
           R R L L+ LGE DV+A  D L+ +  ++   E+ A A+   GS+ +AL LA   G+++ 
Sbjct: 184 RCRRLMLQPLGE-DVVA--DLLTRQRPEVGPTEVAALAKLGEGSIGKALALADEGGLDLY 240

Query: 246 LATLKALDQLPRPRPEDLHALGTRLQGDRADG------------LDLFVEA-------VS 286
              L  L  LPR     LHA G ++     DG            L   + A       ++
Sbjct: 241 RDLLNLLQGLPRLDVPALHAFGDKVARPENDGSFRTVTELLGWWLARLIRAGGRQGAGMA 300

Query: 287 DYVAAQATHAD--VPRHRLVRLGEVWEKVRRSATEADVFNLDRKALVFRIFADLAEAVR 343
           + VA +    +  +    L    EVWEK+       +  +LDRK  V   F  +    R
Sbjct: 301 EVVAGEGALMERLLAAASLEHWLEVWEKITTLFARTEAVHLDRKQAVLGAFMAVERLAR 359