Pairwise Alignments

Query, 468 a.a., Tol-Pal system protein TolB from Xanthobacter sp. DMC5

Subject, 433 a.a., translocation protein TolB from Pseudomonas simiae WCS417

 Score =  220 bits (560), Expect = 8e-62
 Identities = 133/419 (31%), Positives = 217/419 (51%), Gaps = 13/419 (3%)

Query: 55  GAAHAQAARIEITPGAFKPIPIAITDL--LGEPELGRNISGVITSDLRRCGLFAPIDPKA 112
           G A A    I +T G+ +  PIA+      G   L  +++ +++ DLR  G +API    
Sbjct: 17  GIAAADEKNILVTSGSDRATPIAVVPFGWQGGSVLPDDMAQIVSDDLRNSGYYAPIPKGN 76

Query: 113 FVEQITNPDTPRFQDWRVINAQALLTGRVTRQADGRVQVVFRLWDVFAGQQLAAQQFVAQ 172
            + Q        F+DW+ + AQ L+ G +T  A GR+Q+ + L++V   QQ+        
Sbjct: 77  MISQPNQASEVVFRDWKAVGAQYLMVGNIT-PAGGRLQITYTLFNVATEQQVLTGSVSGT 135

Query: 173 PENWRRIAHIVADAIYEKMTGEKGYFDTRIVFVD-ESGPKERRIKRLAIMDQDGANVSYL 231
            E  R +AH ++D  +EK+TG KG F TR+++V  E    +     L   D DGA    L
Sbjct: 136 AEQIRDMAHYISDQSFEKLTGIKGAFSTRLLYVTAERFSVDNTRYTLQRSDYDGARAVTL 195

Query: 232 TRGDSLVLTPRFSPTSQEITYMSYGQGDPKVFLLNIETGQREIVGNFPGMSFSPRFAPDG 291
            +    +L+PRF+P  + I Y+S+ Q  P++F+ +I+TG+RE + NF G++ +P ++PDG
Sbjct: 196 LQSREPILSPRFAPDGKRIAYVSFEQKRPRIFVQHIDTGRREQITNFEGLNGAPAWSPDG 255

Query: 292 QKVIMSLQQGGNSNIFVMDLRSRATTRLTDTAAIDTAPCYSPDGRQICFESDRGGTSQIY 351
            ++   L + GN +I+VM++ SR  +R+T    I+T P +  DG  I F SDRGG  Q+Y
Sbjct: 256 SRLAFVLSKDGNPDIYVMNMASRQISRVTSGPGINTEPFWGKDGSTIYFTSDRGGKPQVY 315

Query: 352 VMNADGSGAKRISFGNARYSTPVWSPKGDWIAYTRQAEG--RFAIGVMRTDGSGERVLTE 409
             N +G GA+R++F     + P  S     +    + +G   F +          ++LT+
Sbjct: 316 KANVNGGGAERVTFIGNYNANPKLSADEKTLVMIHRQDGFTNFRVAAQDLQRGTVKILTD 375

Query: 410 GYHNEGPTFCPNGRVLMFFRDPGGASGPSLYTVDVTGYNEQRLPTPSYGS---DPAWSP 465
              +E  T  PNG ++++     G     L  V + G    RLP P+      +P+WSP
Sbjct: 376 TNLDESATVAPNGTMVIYATRQQGRG--VLMLVSING--RVRLPLPTAQGEVREPSWSP 430