Pairwise Alignments

Query, 615 a.a., DNA mismatch repair protein MutL from Xanthobacter sp. DMC5

Subject, 638 a.a., DNA mismatch repair protein from Pseudomonas simiae WCS417

 Score =  456 bits (1172), Expect = e-132
 Identities = 277/633 (43%), Positives = 377/633 (59%), Gaps = 29/633 (4%)

Query: 3   IRRLPPVLIDRIAAGEVVERPAAVVKELVENALDAGARSIEVVIQAGGRRLVRVTDDGSG 62
           I  L P L ++IAAGEVVERPA+V+KEL+EN++D+GA+ I+V ++ GG +L+RV DDGSG
Sbjct: 12  IELLSPRLANQIAAGEVVERPASVIKELLENSIDSGAKRIDVDVEQGGVKLLRVRDDGSG 71

Query: 63  MGPDDLALCVERHATSKLSG-EDLLAIATLGFRGEALPSIGAVAHLAIASRPPGAAHAFE 121
           +  DDL L + RHATSK+   EDL  + +LGFRGEAL SI +VA L + SR   A  A++
Sbjct: 72  ISSDDLPLALARHATSKIRDLEDLERVMSLGFRGEALASISSVARLTLTSRTRSAEQAWQ 131

Query: 122 VRVDGGVVTPP-RPAALGGGTRVEVRDLFYATPARLKFLKSDRAEGTAAADVVRRLALAR 180
           V  +G  + P  +PAA   GT VEVRDLF+ TPAR KFLK+++ E     +V++RLALAR
Sbjct: 132 VETEGRDMAPRVQPAAHPVGTSVEVRDLFFNTPARRKFLKAEKTEFDHLQEVIKRLALAR 191

Query: 181 PDVAFTLATDERAPATFPARPDDGAGRAQRLADVLGADAGRNVIAVSGVREGVRLDGLAG 240
            DVAF L  + +   +     DD A RA+R++ + G       + +   R G+RL G  G
Sbjct: 192 FDVAFHLRHNGKTILSLHEAHDDAA-RARRVSAICGPGFLEQALPIEIERNGLRLWGWVG 250

Query: 241 LPTFSKANSLSQYLFVNGRPVRDKLLMGAVRAAYADLLPSDRYPVLALFFTLDPRDVDVN 300
           LPTFS++ +  QY FVNGR VRDKL+  AVR AY D+L + R+P   LFF +DP  VDVN
Sbjct: 251 LPTFSRSQADLQYFFVNGRAVRDKLVAHAVRQAYRDVLFNGRHPTFVLFFEVDPSVVDVN 310

Query: 301 VHPAKTEVRFRDGGNVRALIVRTLSDALAARIPSTAASMADRLVALAQTPSLP------- 353
           VHP K EVRFRDG  V   +  TL   L    P     +A  +V     PS P       
Sbjct: 311 VHPTKHEVRFRDGRMVHDFLYGTLHRTLGDVRPDD--QLAAPIVTAVVRPSGPQAGEFGP 368

Query: 354 ----SRAAPGLAEPERGGAFAGFRAAPRLDYDWRQSPARPE---PFRSGEEQVR-----L 401
               S AA  L  P+   ++    A     Y ++ +P RP+   P    +   R     L
Sbjct: 369 QGEMSLAANLLQSPQSQPSYTAPNAGAGSGYQYQYTP-RPQSAVPVAEAQAAYREFFAPL 427

Query: 402 EIAEPSADARADAAPVSAVDLDRPLGAARAQLHETYIVAQTREGLVLIDQHAAHERLVYE 461
             AEP A     A P    D+  PLG A AQL   YI+A+   GLVL+D HAAHER++YE
Sbjct: 428 PGAEPGAPV---ALPEGGGDIP-PLGYALAQLKGIYILAENAHGLVLVDMHAAHERIMYE 483

Query: 462 KLKAAMERDGVARQGLLIPAVVDLDPADADRLTERAADLAALGLVLEPFGPGAVLVREVP 521
           +LK AM  +G++ Q LL+P  + +   +AD   E  +    LG  L+  GP  + +R++P
Sbjct: 484 RLKIAMASEGLSGQPLLVPESLAVSQREADCAEEHHSVFQKLGFELQRLGPETLAIRQIP 543

Query: 522 ALLKDADVTRLVTDLAEHAAEWDDALPLERRLLHVAATMACHGSVRAGRRLRVEEMNALL 581
           ALLK A+  RLV D+     E+  +  ++  +  +  TMACHG++RA RRL + EMN LL
Sbjct: 544 ALLKQAEANRLVADVLADLMEYGTSDRIQAHINELLGTMACHGAIRANRRLALPEMNGLL 603

Query: 582 REMEQTPNAGECNHGRPTFVTLSLKDVEKLFAR 614
           R+ME T  +G+CNHGRPT+  + L D++KLF R
Sbjct: 604 RDMENTERSGQCNHGRPTWTQMGLDDLDKLFLR 636