Pairwise Alignments

Query, 260 a.a., Lipopolysaccharide export system ATP-binding protein LptB from Xanthobacter sp. DMC5

Subject, 257 a.a., ABC transporter from Pseudomonas simiae WCS417

 Score =  169 bits (429), Expect = 4e-47
 Identities = 106/250 (42%), Positives = 144/250 (57%), Gaps = 9/250 (3%)

Query: 4   LLEVKDLMKSYGGVHAVRGVSFTVEAGQMLALIGPNGAGKSTCFNMLNGQIPPDAGTVRI 63
           +L+V+D+  S+ G+ A+  +SF V  G++ ALIGPNGAGKS+  N+LNG    DAG +  
Sbjct: 5   ILQVRDISLSFKGIKAINALSFEVARGEICALIGPNGAGKSSLLNVLNGVYRFDAGEIVF 64

Query: 64  EGKDIKGLPPRAVWRLGVGRTFQITATFASMTVRENVQVALISFH---GLISRVFGFAGA 120
           E +    + P    R G+GRTFQ  A F  M+V +N+   L S H    +I +  G   A
Sbjct: 65  EDQHFHRIDPLGAARRGIGRTFQNNALFKKMSVLDNILTGL-SRHMRSSVIEQALGLPRA 123

Query: 121 ACREEADALLA---LVGLTTQAQRPC--GELAYGDLKRLELAVALANQPRLLLMDEPTAG 175
               EA  L A   L  L  QA R    G L+YG  KR+EL  AL   P LLL+DEP AG
Sbjct: 124 RREAEAFRLRAQGILEFLELQAHRDVLVGNLSYGLQKRVELGRALIAGPSLLLLDEPMAG 183

Query: 176 MAPRERVELMRLTAEIARAKGIGVLFTEHDMDVVFEHADEVMVLNRGQLIARGTPAEVRR 235
           M   E+ E+ R  A++ R  G  V+  EHDM VV   +D V+VL+ G+ +  GTPA+V+ 
Sbjct: 184 MNAEEKQEMARFVADVNRDLGTTVVLIEHDMGVVMGLSDHVVVLDYGRKVGDGTPADVQA 243

Query: 236 DPQVRAIYLG 245
           +P+V A YLG
Sbjct: 244 NPEVIAAYLG 253