Pairwise Alignments

Query, 398 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 378 a.a., branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein (braC-like) from Pseudomonas putida KT2440

 Score = 73.6 bits (179), Expect = 9e-18
 Identities = 78/344 (22%), Positives = 148/344 (43%), Gaps = 20/344 (5%)

Query: 11  ALLLAAGGARAQQGEIKVGEINSYS-ALPAFLDPYRKGMDLALKEVNDAGGIKGKKLVII 69
           A+  A G +   Q ++K+G     + A  AF + Y KG   A  ++N AGG+ G+K+V++
Sbjct: 14  AVATALGVSSYVQADVKIGVAGPMTGANAAFGEQYMKGAQAAADKINAAGGVNGEKIVLV 73

Query: 70  SKDDGGKPADALTAANELVSRDGVVMIAGGFLSNVGLALADFAKQKQVMYLAAEPLTDAL 129
             DD  +P  A+  AN LV +D V+ + G F S+  +  ++   +  V+ +     T+  
Sbjct: 74  KGDDACEPKQAVAVANRLVDQDKVIGVVGHFCSSNTIPASEVYDEAGVIAITPGS-TNPQ 132

Query: 130 VWSKGNDYTFRLRTSNYMQAAMLAEEAAK-LPAKRWATIAPNYEFGQSFVAVFKELLKKR 188
           V  +G    FR+   +  Q  +  +     L  K+ A +     +GQ      K  L+KR
Sbjct: 133 VTERGLSAMFRMCGRDDQQGIVAGDYIVDVLKGKKVAVLHDKDTYGQGLADATKAQLEKR 192

Query: 189 KPDVEFVAEQWPPLNKIDAGPVLQAIDAANPEAILNATF---AGDLVKLVREGNTRGIFK 245
              V+ V  +     + D   V+  I +   + +        AG LV+ +RE   +    
Sbjct: 193 --GVKPVLYEGLTRGEKDFSAVVTKIRSTGADVVYFGGLHPEAGPLVRQLREQGLKD--- 247

Query: 246 NRVVVSYLTGEPEYLDPLKTETPEGWIVTG-YPWYGIK---TAEHQAFLDAYQQLHKDYP 301
               V +++ +    D L +       V G Y  +G       + +A ++ +++   + P
Sbjct: 248 ----VKFMSDDGIVTDELVSTAGGAQYVDGVYMTFGADPRLLPDSKAVVEEFRKAGTE-P 302

Query: 302 RLGSIVGYSTVKSIAAALKATDDYSTAGLVKAMKNLKVSTPFGD 345
              ++  Y++++++AAA             K +K   V T  G+
Sbjct: 303 EGYTLYAYASLQALAAAFNGAKSNKGEDAAKWLKANPVQTVMGE 346