Pairwise Alignments

Query, 398 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 400 a.a., Branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein from Pseudomonas putida KT2440

 Score = 69.7 bits (169), Expect = 1e-16
 Identities = 83/364 (22%), Positives = 140/364 (38%), Gaps = 16/364 (4%)

Query: 4   LVAASLAALLLAAGGARAQQGEIKVGEINSYSALPAFLDPYRKGMDLALKEVNDAGGIKG 63
           L   +L +L L A  A A Q     G  +   A  ++      G  LA+ E     G   
Sbjct: 11  LALGALGSLPLGAHRAFADQPLTFYGLKSMSGAFASYGKYADMGSRLAIAEHPQLLGHPL 70

Query: 64  KKLVIISKDDGGKPADALTAANELVSRDGVVMIAGGFLSNVGLALADFAKQKQVMYLAAE 123
           K  VI ++ + GK   A+    E + +DG     G  LS+  LA++    +   +++   
Sbjct: 71  KYKVIDTEGNAGK---AVRKVQEAIGQDGARFFQGCTLSSSALAVSKEIHKAGGVFMTPV 127

Query: 124 PLTDALVWSKGNDYTFRLRTSNYMQAA-MLAEEAAKLP-AKRWATIAPNYEFGQSFV--- 178
              D +     N  TFR     Y      L   + +LP AKRW TI P Y FG + +   
Sbjct: 128 G-ADEITGKDCNASTFRWSVPTYGAIRETLVPMSRQLPQAKRWYTITPQYVFGDALLDNA 186

Query: 179 -AVFKELLKKRKPDVEFVAEQWPPLNKIDAGPVLQAIDAANPEAILNATFAGDLVKLVRE 237
             VF EL       VE +   +  L + +    L    AA P+ ++   F       +R+
Sbjct: 187 RKVFAEL------GVEHIGNSYHSLQEQEFSGYLTNAIAAKPDVLVLLNFGSQASNALRQ 240

Query: 238 GNTRGIFKNRVVVSYLTGEPEYLDPLKTETPEGWIVTGYPWYGIKTAEHQAFLDAYQQLH 297
               GI     V+   +   +    L ++  EG  +    W+ + T  ++  + A ++ +
Sbjct: 241 AVNFGIKDRMKVLMVWSAGLDQFQELGSDVLEGVYLGAQYWHQVDTPLNKLLVAATRKAY 300

Query: 298 KDYPRLGSIVGYSTVKSIAAALKATDDYSTAGLVKAMKNLKVSTPFGDVVYRAADHQSTM 357
              P       Y   K +  A+        A +  A++ ++   P G+ + R  DHQ   
Sbjct: 301 GINPNYPLAADYIGTKVMLEAIVKAGSLDGAAVSAALQGMRFQGPTGEELIRPGDHQVLK 360

Query: 358 GAYI 361
             Y+
Sbjct: 361 DYYL 364