Pairwise Alignments

Query, 1182 a.a., Nicotinate dehydrogenase subunit B from Xanthobacter sp. DMC5

Subject, 1187 a.a., nicotinate dehydrogenase subunit B (EC 1.17.2.1) (from data) from Pseudomonas putida KT2440

 Score = 1432 bits (3706), Expect = 0.0
 Identities = 723/1193 (60%), Positives = 877/1193 (73%), Gaps = 26/1193 (2%)

Query: 2    SEPRPDPAALLAATGNLAILRP-----AQVVHGLVPSAAPKDGALDLFLLVDDTGTVTAF 56
            S+  P    LLA TG L I+         V  G+ P+   K+  L LF+ V D G V AF
Sbjct: 4    SQQVPSRDQLLAKTGVLLIVDQITPPSGPVAKGVTPTV--KERELALFIAVSDDGMVYAF 61

Query: 57   NGHVDLGTGIRTALAQIVAEELDVALDRVTMVLGHTGVAPNQGGTIASDSIQVSARPLRH 116
            NGHVDLGTGIRT+LAQIVAEELD+ +D+V MVLG T  APNQG TIAS ++Q+SA PLR 
Sbjct: 62   NGHVDLGTGIRTSLAQIVAEELDLRMDQVHMVLGDTERAPNQGATIASATLQISAVPLRK 121

Query: 117  AAAQARAHLVTLAAEALGIPADQLEVEEGIVRPKDGRNTGLSYADLLKGRADRLMLHQET 176
            AAA AR +L+  AA  LG P + L +E+G V   +G    LS+A+L++G+  +L +  + 
Sbjct: 122  AAATARRYLLQQAALRLGCPPEMLRIEDGTVIASNGST--LSFAELVQGKNHQLHIADDA 179

Query: 177  AVKPASEHRIVGRRVPRVDIPAKATGTFTYVHDVRVPGMLHGRVVRPPYAGIDAGPFVGK 236
             +K   ++R+VGR  PRVDIP KATG  TYVHD+R+P MLHGRV+RPPYAG D+G FVG 
Sbjct: 180  PLKAIEDYRLVGRSAPRVDIPGKATGELTYVHDMRLPNMLHGRVIRPPYAGHDSGDFVGN 239

Query: 237  SLIRVDEHSVAHVPGVVAVVTMGDFIGVVAEREEQAAEAARVLKAEWRD-TPALPDLSRT 295
            SL+ VDE S+AH+PGVVAVV + DF+GVVAEREEQA  AA  LK  W+  T  LPDLS  
Sbjct: 240  SLLAVDESSIAHLPGVVAVVVIRDFVGVVAEREEQAIRAAHELKVSWKPFTGKLPDLSDV 299

Query: 296  EEALRGAEKAKTRLLHEQGNLDTARADAAQVLEATYVWPYQMHASIGPSCAVADVREDSA 355
             +A+R   + +  +L +QG++D   A+A+Q L  +Y+WPYQ+HASIGPSCA+AD      
Sbjct: 300  AQAIRDNPRVQRTVL-DQGDVDGGIANASQRLSRSYLWPYQLHASIGPSCALADFTAGQI 358

Query: 356  TIWAGTQNPYWLRTDISLLLGLPEEDIEIIRFEAAGCYGRNCADDVAADAALLSRAVGRP 415
             +W+GTQNP+ LR D++ LL   E  IEIIR EAAGCYGRNCADDV ADA LLSRAV RP
Sbjct: 359  RVWSGTQNPHLLRADLAWLLACDEARIEIIRMEAAGCYGRNCADDVCADAVLLSRAVQRP 418

Query: 416  VRVQLTREQEHAWEPKGAGQLMEVKGGINADGTPAFYDFRTRYPSNAAVTLALLLTGRVP 475
            VRVQLTREQEH WEPKG  QLME+ GG+NADG+ A YDF+T YPSN A TLALLLTG V 
Sbjct: 419  VRVQLTREQEHVWEPKGTAQLMEIDGGLNADGSVAAYDFQTSYPSNGAPTLALLLTGAVE 478

Query: 476  ADNPVYEMGDRTAIPPYAYDVMRVAVDDVAPIVRASWLRGVSALPNSFAHESYVDELAAA 535
                ++EMGDRT+IPPY Y+ MRV ++D+ P+VRASW+RGVSA+PNSFAHESY+DELA A
Sbjct: 479  PVPALFEMGDRTSIPPYDYEHMRVTINDMTPLVRASWMRGVSAMPNSFAHESYIDELAFA 538

Query: 536  AGVDPVDYRLRHLHDPRAVDLVKATAERAGWQKRTGPRQEVVEGDIVRGQGFAYALYVHS 595
            AGVDPV+YRL+HL DPRA+DLVKATAERA WQ  T P Q   EGD++RG+GFAYA Y+HS
Sbjct: 539  AGVDPVEYRLKHLSDPRAIDLVKATAERAQWQPHTRPMQTQAEGDVLRGRGFAYARYIHS 598

Query: 596  KFPGYGAAWSAWVADVEVNTKTGDVAVKRVTVGQDSGLMINPAGIEHQIHGNVIQSTSRA 655
            KFPG+GAAW+AWVADV V+ +TG+VAV RV +G D+G+M+NP G+ HQIHGNVIQSTSR 
Sbjct: 599  KFPGFGAAWAAWVADVAVDRRTGEVAVTRVVIGHDAGMMVNPEGVRHQIHGNVIQSTSRV 658

Query: 656  LKEQVTFDEQAVTSREWGAYPILTFPEVPVINVVLMHRPDDPPLGSGESASVPSAAAIAN 715
            LKEQV+F+E  V S+EWG YPILTFPE+P I+V+++ R  +PP+GSGESASVPSAAAIAN
Sbjct: 659  LKEQVSFEESTVASKEWGGYPILTFPELPAIDVMMLPRQHEPPMGSGESASVPSAAAIAN 718

Query: 716  AIFDATGVRLREPPFTPDRVRAALAGE-------APPRPVKEKKRRPWFAMAGAALAGAL 768
            AIFDATG+R RE P T +RVRAAL GE       AP +P   K+ + WF         AL
Sbjct: 719  AIFDATGIRFRELPITAERVRAALGGEGQGPDAPAPAQP-STKRSKWWFGSLAGVFGAAL 777

Query: 769  GMATLVLPIRGAIAPIAPPDPATFSADMIARGKVLAALGDCAVCHTAEGGIANAGGRPLH 828
            GM    LP R  IAP+ PP   ++SA M+ RG+ +AA GDCAVCHT  GG ANAGG  + 
Sbjct: 778  GMLATALPWRAEIAPVTPPGVGSWSAAMLERGRQVAAAGDCAVCHTVSGGKANAGGLAMD 837

Query: 829  TPFGTVYSTNLTPDVETGIGTWSYAAFERAMREGIGRDGRHLYPAFPYTAFSRISDADMQ 888
            TPFGT+YSTN+TPD ETGIG WS+AAFERAMREGI RDGRHLYPAFPYT+F  I+DADMQ
Sbjct: 838  TPFGTLYSTNITPDPETGIGRWSFAAFERAMREGISRDGRHLYPAFPYTSFRNINDADMQ 897

Query: 889  ALYAFLMSQPAVTAAPPENRMTFPFNIRPLMAGWNFLFHRPSQLQAEPARSPQWNRGRYL 948
            ALYA+LMSQ  V    P N+M FPFN RPLMAGWN  F +  + Q +P RS QWNRG YL
Sbjct: 898  ALYAYLMSQTPVRQEAPANQMRFPFNQRPLMAGWNARFLQRGEYQPDPQRSAQWNRGAYL 957

Query: 949  VEGLGHCGACHTPRNALGAEKGGAAYLAGGVADGWEAPALTELSKAPIPWTEDELFTYLR 1008
            V+GLGHC ACH+PRN +GAEKGG++YLAGG+ DGWEAPAL  L K+  PW+EDELF YL 
Sbjct: 958  VDGLGHCTACHSPRNLMGAEKGGSSYLAGGMVDGWEAPALNALGKSSTPWSEDELFNYLS 1017

Query: 1009 TGFSRFHGTAAGPMAPVVHALSEAPDADVRAMAVYLSSLSGPTIADPVTAAATLEAKAEA 1068
            TGFS  HG AAGPM PVV  L+  P +DVRA+A YLSSL G   A    AA  ++     
Sbjct: 1018 TGFSEKHGVAAGPMGPVVSELATLPKSDVRAIAHYLSSLEGEPQALAANAAPQVDTHVSL 1077

Query: 1069 SLRPMDTVGGRLFAGACAACHAPE-GPTLFGARPALALNTNVHAARPDNLIRVILEGIPK 1127
            S       G R+F GAC  CH+   GP LFG  P++A+N+NVH+  PDNL+RV+L GIP 
Sbjct: 1078 S------NGERVFKGACLGCHSDGLGPKLFGVSPSMAVNSNVHSDLPDNLLRVVLHGIPT 1131

Query: 1128 PAAPELGDMPAFRDSLNDAQVADLVRYMRAKFAPDTPAWEGLEGTVARLRAAP 1180
            PA  +LG MP F+DSL+D QVADL  Y+R +FA D PAW+GL    A++RA P
Sbjct: 1132 PATRDLGYMPGFKDSLSDRQVADLAAYLRHRFAADKPAWQGLASKAAQVRANP 1184