Pairwise Alignments

Query, 392 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 433 a.a., GGDEF domain protein from Pseudomonas putida KT2440

 Score =  116 bits (291), Expect = 1e-30
 Identities = 119/390 (30%), Positives = 189/390 (48%), Gaps = 39/390 (10%)

Query: 7   PIVMNAVVAALFAASYLALALLHRG--NTAPLWFAASFGAIVI-TPLALLAQSYTGWVVL 63
           P  M  +  AL AA+ L LA+  R    T+ L+++A F  I + + LALL     G  +L
Sbjct: 50  PPTMLTISVALAAAAALYLAIEWRSVRETSLLYWSAGFATITVGSTLALLR----GIGLL 105

Query: 64  FAPVIY---LSFAACLILMVPGLAVLYRKPIPWGLVTVLGIVTVVSAALALQ-----LPV 115
           F  + +   L   A +  ++  L     +     L+ VL    ++   +  Q     L V
Sbjct: 106 FIGIWFANGLLVVAHVFFLIGVLRFTQERLSRAWLMIVLVWFALLLLPVGPQWSKVMLMV 165

Query: 116 NTL-VRVVSYQTPFVLATAASCWVVLRDSPRRLRDLLLAGLFALLCMHVPLKAALAISLH 174
           N+L V  ++ +  F+L        V     R +  LL+ GLF +       KAA+AI+  
Sbjct: 166 NSLLVASLTLKASFLLRPHGKSLSVGAVQLRYV--LLIHGLFYVA------KAAIAIT-- 215

Query: 175 TGPHQINYMDTPFAVVAQISTGILMVATGLLILVISVLELVRETLE-----VADTDALSG 229
             P  +  + T   ++ Q+S  ++  A  ++++ +S+   VR   E     +A  D L+ 
Sbjct: 216 --PGTLIDLATFGGLIIQVS--LVEGAMAIMLIALSMTGTVRYRREERIARLAARDPLTA 271

Query: 230 LLNRRGFEQRASDLVHGRTGAAPFALLLIDIDHFKAINDTFGHGVGDQTIRGFGDMLQHT 289
           L NRR  E RA       + A P ALLLIDID+FK +ND  GH  GD+ +    +M++  
Sbjct: 272 LYNRRALEVRAGHFFKDVSPAQPGALLLIDIDNFKLVNDLHGHIAGDRLLIALSEMIRTA 331

Query: 290 LPQSALIGRVGGEEFAILLERASPEMARLQAESVRLAIIGHDDQDVP-PFTVSIGVALAS 348
           LP+ +L  R+GG+EF ILL  AS E        +R     + D+ VP P  V++ +    
Sbjct: 332 LPERSLAARLGGDEFVILLSGASSERVMELGSGLREQFQQYADKTVPTPQAVTLSIGANV 391

Query: 349 RDEP---LLATLERADAALYEAKRSGRNRV 375
            D+P   L A +E+ D ALY++KR GR+ +
Sbjct: 392 FDQPPASLAALIEQGDVALYQSKRGGRDSI 421