Pairwise Alignments

Query, 610 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 642 a.a., putative ABC transporter, periplasmic binding protein from Pseudomonas putida KT2440

 Score =  323 bits (827), Expect = 2e-92
 Identities = 210/602 (34%), Positives = 298/602 (49%), Gaps = 9/602 (1%)

Query: 11  TRTAPSVLALLLLVFGATKPAVAQALDKASAITMRGK-PALPPGFTSLAYANSNAPKGGR 69
           +R  P    L  LVF      V  A     A+T+ G+ P     F    Y N +APKGG 
Sbjct: 27  SRVNPLPQVLWGLVFSCIGFTVQAA--PTHALTVYGEAPRYAASFRHFDYVNPSAPKGGI 84

Query: 70  LTLSLL--GTFDSLNPFIVKGTSPGVLRGTVTESLMARSLDEPFTLYPLIARTVSTDEKR 127
           L  S +  G FD + P+I KG     + G +   L  RS DEP+T+Y LIAR +      
Sbjct: 85  LRRSAIEIGQFDHILPYIDKGIGVSEVDGLLYAPLAVRSYDEPYTVYGLIARRMERGPND 144

Query: 128 SFVEFALDPAARFSDGSALTSADVLFSFALMRDMGRPNHRLYYGKITKAEAPDAHTVRFT 187
            ++ F +DP A F+DG  + + DV F+F L+   G   +R  +  + +      H+VRF 
Sbjct: 145 EWLRFDIDPRATFADGRPVRAEDVRFTFDLLMSKGSLKYRTQFADVARVTVERLHSVRFD 204

Query: 188 FA-EPDPELPLIMGLMPVFSEQATDRTRFEETT-LTPLLGSGPYRVTNVNAGAALTLERN 245
              E    L L +  +PV  E    +  F         +GSGPYR+  ++ G ++T ER+
Sbjct: 205 LKPEHGRTLALDLASLPVMPEHDLQQRDFANGAGFDKPVGSGPYRIGRIDNGRSITFERD 264

Query: 246 PDYWGRNVAFNRGLYNFDRLDTVYFRDANSEFEAFRKGLIDARFESDPGRWETAYDFPAV 305
           P +W R++  +RG YNFD+L   YF D     +  + G  D   E     +   Y+   +
Sbjct: 265 PAWWARDLPASRGRYNFDKLRIEYFGDTEVARQVLKGGGYDYNREFSATAYTLGYNGAQL 324

Query: 306 RSGEVVKETIPTGIPKPYSAFVFNTRRPLLADIRVRQALIELFDFEWLDRSFYHGLYRRT 365
             G + +  +    P+    FVFN  +P   D RVRQAL  L+DFEW +R     LY R 
Sbjct: 325 DDGRLQRAHLGPAKPQVAQGFVFNLDQPQFKDRRVRQALGMLWDFEWSNRQMMRNLYIRQ 384

Query: 366 GSFFEGSALSSIGRPADARERALLAPFPGSVVPDVLAGTYRPPVSDGTGRDRIRLKAALD 425
            S F  + L++   P DA E  LLAP  G V  +V    +  PV+DG+G  R +   AL 
Sbjct: 385 QSVFSNTPLAARQLP-DAGELKLLAPLRGQVPDEVFTTVFTAPVTDGSGIIRQQQLQALA 443

Query: 426 LLEQAGFVLRKGALVDAGNGRPFALELMVVTRDQERLALAWQAQLKRAGITLNVRSVDAV 485
           LLEQAG+      LV++  G P A   +      ERL L W+  L + G+TLN+R+VD+ 
Sbjct: 444 LLEQAGWHPEGDRLVNS-QGTPLAFTFLNGQAGLERLLLPWKRNLAQIGVTLNIRNVDSA 502

Query: 486 QFDTRRQAYDFDMMPYAWSQSLSPGNEQAFYFGAAAADTPGSRNYMGAKAPAIDATIAAL 545
           Q+  R  A D+DM+   +  +LSPG E   YFG+AAA  PGS N M  + PA+D  I  L
Sbjct: 503 QYVNRLMARDYDMIVTGYPVTLSPGAELYNYFGSAAAHDPGSNNLMVLQDPAVDHLIDGL 562

Query: 546 IAARDEEAYVAAARALDRVLISGAYAVPLFHTPGQWLARWTRIARPERASLYGTLPETWW 605
           + A  +   +  A ALDRVL    Y +P ++ PG     W R   P+  + Y    +TWW
Sbjct: 563 VRADTQADMLRHAHALDRVLQWNYYWIPNYYPPGSSTVWWNRFGLPKVQATYDEGLDTWW 622

Query: 606 RV 607
            V
Sbjct: 623 EV 624