Pairwise Alignments

Query, 610 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 558 a.a., oligopeptide ABC transporter substrate-binding protein OppA from Escherichia coli ECRC62

 Score = 62.8 bits (151), Expect = 4e-14
 Identities = 116/535 (21%), Positives = 196/535 (36%), Gaps = 113/535 (21%)

Query: 80  SLNPFIVKGTSPGVLRGTVTESLMARSLDEPFTLYPLIARTVSTDEKRSFV-EFALDPAA 138
           SL+P  ++G     +   + E L+   LD     +P      S D K + V  F L   A
Sbjct: 66  SLDPHKIEGVPESNISRDLFEGLLVSDLDG----HPAPGVAESWDNKDAKVWTFHLRKDA 121

Query: 139 RFSDGSALTSADVLFSFALMRDMGRPN---HRLYYGKITKAE---------------APD 180
           ++SDG+ +T+ D ++S+    D    +     L YG I   +               A D
Sbjct: 122 KWSDGTPVTAQDFVYSWQRSVDPNTASPYASYLQYGHIAGIDEILEGKKPITDLGVKAID 181

Query: 181 AHTVRFTFAEPDPELPLIMGLMPVFSEQATDRTRFEETTLTP--LLGSGPYRVTNVNAGA 238
            HT+  T +EP P    ++              +F E    P  ++ +G Y + +     
Sbjct: 182 DHTLEVTLSEPVPYFYKLLVHPSTSPVPKAAIEKFGEKWTQPGNIVTNGAYTLKDWVVNE 241

Query: 239 ALTLERNPDYWGRNVAFNRGLYNFDRLDTVYFRDANSEFEAFRKGLIDARFESDPGRWET 298
            + LER+P YW      N      +++  +      ++   +R G ID  + + P     
Sbjct: 242 RIVLERSPTYW------NNAKTVINQVTYLPIASEVTDVNRYRSGEIDMTYNNMP----- 290

Query: 299 AYDFPAVRSGEVVKETIPTGI-PKPYSA---FVFNTRRPLLADIRVRQALIELFDFEWLD 354
                 +   + +K+ IP  +   PY     +  N ++P   D+RVR AL          
Sbjct: 291 ------IELFQKLKKEIPDEVHVDPYLCTYYYEINNQKPPFNDVRVRTAL---------- 334

Query: 355 RSFYHGLYRRTGSFFEGSALSSIGRPADARERALLAPFPGSVVPDVLAGTYRPPVSDGT- 413
                                 +G   D     + A        D+ A  Y PP +DG  
Sbjct: 335 ---------------------KLGMDRDIIVNKVKAQ------GDMPAYGYTPPYTDGAK 367

Query: 414 --------GRDRIRLKAALDLLEQAGFVLRKGALVDAGNGRPFALELMVVTRD-QERLAL 464
                        R + A  LL +AG+   K          P  + L+  T D  ++LA+
Sbjct: 368 LTQPEWFGWSQEKRNEEAKKLLAEAGYTADK----------PLTINLLYNTSDLHKKLAI 417

Query: 465 AWQAQLKRAGITLNVRSVD---AVQFDTRRQAYDFDMMPYAWSQSLSPGNEQAFYFGAAA 521
           A  + L +  I +NV+ V+       DTR Q   FD+    W       NE   +     
Sbjct: 418 A-ASSLWKKNIGVNVKLVNQEWKTFLDTRHQG-TFDVARAGWCADY---NEPTSFLNTML 472

Query: 522 ADTPGSRNYMGAKAPAIDATIAALIAARDEEAYVAAARALDRVLISGAYAVPLFH 576
           +++  S N    K+PA D+ +A  +   DE    A     ++ L   +  VP+++
Sbjct: 473 SNS--SMNTAHYKSPAFDSIMAETLKVTDEAQRTALYTKAEQQLDKDSAIVPVYY 525