Pairwise Alignments

Query, 337 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 355 a.a., membrane protein from Pseudomonas simiae WCS417

 Score = 55.5 bits (132), Expect = 2e-12
 Identities = 59/239 (24%), Positives = 101/239 (42%), Gaps = 15/239 (6%)

Query: 89  VTQLVNELPTAWSAFEQRF---HLEGMSDDLLKRAEAAAPSGET-VLSFVQGFTSNLFQV 144
           + Q  N LP  +     RF   +LEG+ + ++K A   +    T   SF QG    L   
Sbjct: 106 IEQFKNVLPPYFQHLLDRFGMGNLEGLREKIVKSAMQGSQFFATQAFSFGQGTFDFLV-- 163

Query: 145 VLGTFLVVVGGIYFAV--SPELYRRMFLSLWRPSERPAAARRLAMVSEDLRHFLKAQLIA 202
              +F +++  +YF +   PEL R++  ++  P   P   R     +  +R  +K  ++ 
Sbjct: 164 ---SFFIMLYLLYFLLRDGPELVRKVRTAV--PLAEPQKRRLQLKFNRVVRATVKGNVLV 218

Query: 203 MVVVGVLTFIGLTVVGVPSSLALALFAGLAEFVPMIGPVMAAAPAVLIALTMGAD-TGLW 261
            V  G L  +    + +PS+L  A+       +P +G  +   P     L  GA   G+ 
Sbjct: 219 AVTQGALGGLIFWFLDIPSALLWAVLMAFLSLLPAVGAGIVWGPVAAYFLLSGAIWQGVV 278

Query: 262 TLLVFVGVQQAESNIITPLLQQRMVSLPPAVTLFAVVAFGSIFGALGVVLATPLTVVAF 320
             L  V V     N++ P+L  +   +P  + L + +   S+FG  G V+  PL    F
Sbjct: 279 LALFGVFVIGLVDNVLRPILVGKDTKMPDYLILISTLGGLSVFGLNGFVIG-PLVAALF 336