Pairwise Alignments

Query, 535 a.a., Protein translocase subunit SecD from Xanthobacter sp. DMC5

Subject, 1035 a.a., multidrug efflux transport system - membrane subunit from Pseudomonas putida KT2440

 Score = 57.8 bits (138), Expect = 2e-12
 Identities = 37/150 (24%), Positives = 71/150 (47%), Gaps = 7/150 (4%)

Query: 384 VTVFMLAVYGLFG-----LFALIALAVHIILMFSLQSVLGATLTLPGIAGVVLTIGMAVD 438
           V + +L VY   G     L   +A+ V ++  F++  V G +L    +  ++L  G+ VD
Sbjct: 342 VVLVILVVYLFLGSLRASLIPSLAVPVSLVGTFAVMYVCGFSLNNLSLMALILATGLVVD 401

Query: 439 SNVVIFERMRDEAREGRSAISAIDKGFVNALGTILDANITSLATAVILFLMGG--SGPVR 496
             +V+ E +      G+  + A   G      T+L  N++ +A  V +  MGG      +
Sbjct: 402 DAIVVLENISRHIENGQPPMKAAFLGAKEVGFTLLSMNVSLVAVFVSILFMGGIVRNLFQ 461

Query: 497 GFAVTYILGLLTTMFTAYTLTRLMIAYWVK 526
            F++T    ++ ++  + TLT ++ A W+K
Sbjct: 462 EFSITLAAAIIVSLVVSLTLTPMLCARWLK 491