Pairwise Alignments

Query, 535 a.a., Protein translocase subunit SecD from Xanthobacter sp. DMC5

Subject, 522 a.a., protein translocase subunit SecD from Magnetospirillum magneticum AMB-1

 Score =  501 bits (1290), Expect = e-146
 Identities = 271/540 (50%), Positives = 374/540 (69%), Gaps = 24/540 (4%)

Query: 1   MLHFSRLKTTAILVTIAIGMLFAVPNVLSPGMLDHLPSWLASSRVTLGLDLQGGSHILLE 60
           M HF + K   + +    G++FAVPN+LS    D +P WL    V+LGLDLQGGS++LLE
Sbjct: 1   MNHFPKWKIALVAIVSLFGIVFAVPNLLSRDQADRMPHWLQP--VSLGLDLQGGSYLLLE 58

Query: 61  VDGPALRRERTEQLRDEVRRVLRDQKIGYSNLALRDTSVTLRLRDPNDTQKAVTELRKLA 120
           VD   + RE+   L + VR  LR +KI YS+L  R   V++R+ + ++  KA   LRK+ 
Sbjct: 59  VDTAYVFREQLTSLVEGVRTTLRKEKIKYSDLGARGDQVSVRIIEADERAKAREFLRKID 118

Query: 121 APVTNALFGNSSGEMDLTVSSGSDGTVTLQLTDAGLTAKMRSAVDQSIEIIRRRIDQLGT 180
           A              +  + +  DG++ L+ ++  + A+  +A++QS+EI+RRRID+LGT
Sbjct: 119 A--------------EAAIETRDDGSMVLKYSEQAVKARKTAAIEQSLEIVRRRIDELGT 164

Query: 181 VEPNIQRQGLDRILVQVPGLQDPQRLKNLLGQTAKLSFRMVDQSMSPQQALEGRAPPESE 240
            EP+IQRQG DRI+VQ+PG++DP R+K LLG+TAKL+F ++D S    +A +GR PP S 
Sbjct: 165 REPSIQRQGEDRIVVQLPGVKDPDRIKALLGKTAKLTFHLLDDSTGADEAQKGRVPPGSM 224

Query: 241 VLKGQD---GQP--YLVEKQVRVSGEDLVDAQPGFDQNSREPIVSFRFNNNGAKRFAAVS 295
           +L   +   G P  Y+V K++ V G+ LVD++  + +    P+VSFRF+  GAK+F   +
Sbjct: 225 LLPSAEKERGMPESYVVRKRIEVGGDMLVDSKATYSEG--RPVVSFRFSAAGAKKFGDAT 282

Query: 296 QESVGRPFAIVLDNQVISAPVIREPILGGAGQISGSFTVQQANDLAILLRAGALPAPLKV 355
           +E+ G+  AIVLD +VISAP I EPILGG+G ISGSF+VQQA DL++LLRAGALPAPL+V
Sbjct: 283 RENAGKFLAIVLDEKVISAPRINEPILGGSGIISGSFSVQQAQDLSLLLRAGALPAPLQV 342

Query: 356 VEERTVGPSLGADSIQAGKTAAYVAGGLVTVFMLAVYGLFGLFALIALAVHIILMFSLQS 415
           +EERTVGP LGADSIQAG  A+ +   LV V M+ VYG  G  A +A+ +++IL+ +  S
Sbjct: 343 LEERTVGPDLGADSIQAGAVASLLGLALVVVLMIIVYGSLGALADLAMVLNLILLLASLS 402

Query: 416 VLGATLTLPGIAGVVLTIGMAVDSNVVIFERMRDEAREGRSAISAIDKGFVNALGTILDA 475
            LGATLTLPGIAG+VLT+GMAVD+NV+I+ERMR+E R GRS +SAI  G+  A GTI DA
Sbjct: 403 ALGATLTLPGIAGIVLTMGMAVDANVLIYERMREEQRNGRSIMSAIQAGYDRAFGTIFDA 462

Query: 476 NITSLATAVILFLMGGSGPVRGFAVTYILGLLTTMFTAYTLTRLMIAYWVKWRRPAKLPI 535
           ++T+L  A +LF   GSGPVRGFAVT  LGLL ++FTA  + R+M+  WV+WRR   LP+
Sbjct: 463 HVTTLVAAALLFQF-GSGPVRGFAVTLTLGLLASLFTAVLVNRIMVVTWVRWRRLKTLPL 521