Pairwise Alignments

Query, 596 a.a., 3-methylmercaptopropionyl-CoA dehydrogenase from Xanthobacter sp. DMC5

Subject, 592 a.a., Acyl-CoA dehydrogenase family protein from Pseudomonas putida KT2440

 Score =  624 bits (1609), Expect = 0.0
 Identities = 323/598 (54%), Positives = 407/598 (68%), Gaps = 8/598 (1%)

Query: 1   MQVYTPPLRDMRFVLHELHG-SEELSKLKGLEEL-SPDLIDAVLEEAGKFVTEVLAPLNQ 58
           M  Y  PLRDMRFVL+E+   +E+ ++L GL E+   D   AVLEEAGK     +APL++
Sbjct: 1   MADYKAPLRDMRFVLNEVFNVAEQWTQLPGLAEVVDADTAMAVLEEAGKVTARTIAPLSR 60

Query: 59  SGDLEGCTYENGVVRTPKGFKEAYTAFREGGWNGIACDPKYGGQGLPASVNKLVEEMLCS 118
           + D EGC ++NG VRTP GF EAY  + EGGW G+  DP +GG G+P +++  VEEM+ +
Sbjct: 61  AADEEGCHWDNGAVRTPAGFIEAYNTYAEGGWVGVGGDPLFGGMGMPKAISAQVEEMVNA 120

Query: 119 GNLAFGICPGLTHGAYQALKAYASEELKERFLPKMVDGVWSGSMCLTEPQCGTDLGLVRT 178
            +LAFG+ P LT GA  ++ A+ASE LKE++LP M  GVW+GSMCLTEP  GTDLG++RT
Sbjct: 121 SSLAFGLYPMLTAGACLSINAHASEALKEKYLPNMYAGVWAGSMCLTEPHAGTDLGIIRT 180

Query: 179 KAEPKADGSYKITGNKIFISAGEQDMTENIVHLVLARLPDAPKGIKGISLFLVPKFLPKE 238
           KAEP+ADGSYK++G KIFI+ GE D+TENI+HLVLA+LPDAP G KGISLFLVPKFL  E
Sbjct: 181 KAEPQADGSYKVSGTKIFITGGEHDLTENIIHLVLAKLPDAPAGPKGISLFLVPKFLVNE 240

Query: 239 DGSVGPRNGVLCTGIEHKMGIHGSSTCQMSFDEATGWLVGEPHKGMRAMFAMMNSERLSV 298
           DGS+G RN   C  IEHKMGI  S+TC M+FDEA G++VGEP+KG+ AMF MMN ERL V
Sbjct: 241 DGSLGARNPATCGSIEHKMGIQASATCVMNFDEAVGYIVGEPNKGLAAMFTMMNYERLGV 300

Query: 299 GTQGLGLGEAAYQAAVVYAKERLQGRALSGAKHPDKPADPIIVHPDVRRTLMTMRAYNEG 358
           G QGL   E +YQ AV YA++RLQ RA +G +  DK ADPIIVHPDVRR L+TM+A  EG
Sbjct: 301 GIQGLASAERSYQNAVEYARDRLQSRAPAGPQAKDKAADPIIVHPDVRRMLLTMKALIEG 360

Query: 359 CRALAGWVARALDLMERAEDPEESKRAEDFTALMTPIVKALFTDLGFEATSMGMQVYGGH 418
            RA + +VA  LD  + +ED    KR+E+  AL+TP+ KA  TDLG E    G QV+GGH
Sbjct: 361 GRAFSTYVAMQLDSAKYSEDASVRKRSEELVALLTPVAKAFLTDLGLECAVHGQQVFGGH 420

Query: 419 GYIRDHGMEQYVRDARIAMIYEGTNGVQALDLVGRKLPAHMGRYLRSFFHPVLNYMDAKL 478
           GYIR+ G EQ VRD RI  IYEGTNG+QALDL+GRK+ A  G Y + F   +  ++    
Sbjct: 421 GYIREWGQEQLVRDVRITQIYEGTNGIQALDLMGRKVVASGGAYYKLFSDEIRQFITGA- 479

Query: 479 DDENLGPLITPLSKAFGALQLATAHIAEKGLKDPEEAGAAATEYLRLFGLVALGYMWVRM 538
               L     PL  +   L   T  + ++   +P E GAA+ EYL  FG VA GYMW  M
Sbjct: 480 -GSELDEFAKPLGASLDQLDGLTEWVLQQAKGNPNEIGAASVEYLHAFGYVAYGYMWALM 538

Query: 539 AEVAFEKRVSNPDDAAFYDAKIVTARFFMEKLLPDVAALWGSIKAGKGSMMALDEAMF 596
           A  A    ++   DA FY  K+ TARF+  +LLP V +L  S+KAG  S+  LD   F
Sbjct: 539 ARAA----LAGEGDAPFYSGKLGTARFYFARLLPRVDSLVASVKAGSESLYLLDAEQF 592