Pairwise Alignments

Query, 1052 a.a., Multidrug resistance protein MdtC from Xanthobacter sp. DMC5

Subject, 1032 a.a., multidrug efflux transport system - membrane subunit from Pseudomonas putida KT2440

 Score =  960 bits (2482), Expect = 0.0
 Identities = 498/1018 (48%), Positives = 706/1018 (69%), Gaps = 5/1018 (0%)

Query: 3    SELCIRRPVMTTLIMLSLVVAGLFAYRQLPVAALPRVDFPTINISASLPGASPETMATSV 62
            S L I RPV TTL ML++V+AGL AY+ LPV+ALP+VD+PTI +    PGASP+ M ++V
Sbjct: 4    SRLFILRPVATTLSMLAIVLAGLIAYKLLPVSALPQVDYPTIRVMTLYPGASPQVMTSAV 63

Query: 63   ATPIERQLATIAGISSLTSSSTQGSTSITVQFDLNRSIDAAALDVQSALSVAQRQLPDEM 122
              P+ERQ   + G+  + S+S+ G++ +T++F+L+ ++D A   VQ+A++ A   LP ++
Sbjct: 64   TAPLERQFGQMPGLEQMASTSSGGASVLTLRFNLDMNMDVAEQQVQAAINAASNLLPSDL 123

Query: 123  TTPPSFRKVNPADAPVILLAISSDTLPLSAVNEYADTLIGQQISQLPGVAQVQIYGSQKY 182
              PP + KVNPAD PV+ LAISS T+PL  +N+  DT + Q+++Q+ GV  V I G Q+ 
Sbjct: 124  PAPPVYNKVNPADTPVLTLAISSKTMPLPKLNDLVDTRVAQKLAQISGVGMVSIAGGQRQ 183

Query: 183  AVRIRVDPAAAGARNISADDIQRAVEAAASNTPLGIVSGPKQAQTIDMGTPKADASQFRR 242
            AVRI+V+  A  A  ++ DD++  + A+  N P G   GP +   +D         ++  
Sbjct: 184  AVRIKVNVDALAANGLNLDDVRTLIGASNVNQPKGNFDGPTRVSMLDANDQLRSPEEYAN 243

Query: 243  VVVKARDGSVVRLEEIAVVSDGVENERVASWFNDRRAVVLAVVRQPDANTVQVVDEVRNR 302
            +++   +G+ +RL+++A + DG ENER+A+W N+  AV+L + RQP AN ++VVD ++  
Sbjct: 244  LILAYNNGAPLRLKDVAEIVDGAENERLAAWANENHAVLLNIQRQPGANVIEVVDRIKGL 303

Query: 303  LPQFRAQLPGSVGIEVLNDRSVSVRDAVADVQKTLFEAIVLVVLVIFLFLRNVRATIIPS 362
            LP     LP  + + VL DR+ ++R AV DVQ  L  AIVLVV+V F+FLR   AT+IPS
Sbjct: 304  LPSITDNLPAGLDVSVLTDRTQTIRAAVKDVQHELLIAIVLVVMVTFVFLRRFSATLIPS 363

Query: 363  LALPLSIIATFAAMWGFGYSINNMTLLALTLCVGFVVDDAIVVLENIYRHVEAGESPFRA 422
            +A+PLS+I TF  M+  G+S+NN+TL+ALT+  GFVVDDAIV+LENI RH+E GE+P +A
Sbjct: 364  IAVPLSLIGTFGVMYLAGFSVNNLTLMALTIATGFVVDDAIVMLENISRHIEEGETPMQA 423

Query: 423  ALRGSREIGFTIISMTLSLVAVFIPVLFMGGVVGRVFREFAVTISVAILVSGFVSLTLTP 482
            AL+G+R+IGFT+IS+T SL+AV IP+LFM  VVGR+FREFA+T++VAIL+S  VSLTLTP
Sbjct: 424  ALKGARQIGFTLISLTFSLIAVLIPLLFMADVVGRLFREFAITLAVAILISLVVSLTLTP 483

Query: 483  MLCARVMKPVDHTKKPGWFFRVTERMFDSWLNAYRVSLDFVLRRKPFMLVVTFATIGLSV 542
            M+CAR++K     ++ G F+R +    D  +  Y  +L +VL+ +P  L+V  A++ L+V
Sbjct: 484  MMCARLLKREPKEEEQGRFYRASGAWIDWLIQHYGSALQWVLKHQPLTLLVAVASLVLTV 543

Query: 543  YLYIVIPKGFFPQEDNGFITGTVEAATDSSFAAMVERQKQVADVVRADPAVDYIVSTAGA 602
            +LY+V+PKGFFP +D G I G  EA   +SFAAM ERQ+ ++ V+  DPAV  + S  G 
Sbjct: 544  FLYMVVPKGFFPVQDTGVIQGISEAPQSTSFAAMSERQQALSKVILQDPAVQSLSSYIGV 603

Query: 603  TGSSRTTNTGRLFIALKPKGNGPGERVGSANDVIQGLRKRVAQVPGVNVFFQPVQNINVG 662
             G + T N+GRL I LKP     GER  SA++VI  L+ +V ++ G+ +F QPVQ++++ 
Sbjct: 604  DGDNATLNSGRLLINLKPH----GERDVSASEVISRLQPQVDRLVGIRLFMQPVQDLSIE 659

Query: 663  GVASKSQYQYTLQSPDTETLYAFAQTMEQRLAQLPGLRDVTSDLQITNPQLTIELDKDKA 722
               S++QYQ++L SPD + L  ++  + Q L Q P L DV SDLQ    Q+ + +D+D A
Sbjct: 660  DRVSRTQYQFSLSSPDADLLAQWSGKLVQALQQRPELADVASDLQDKGLQVYLVIDRDMA 719

Query: 723  AALGITEQQLRDALYTQFGTRQIATLYTPTNQFAIIAEVQPIFQRDPSDLGRVYLRTTSG 782
            + LGI+  Q+ +ALY  FG RQI+T+YT  +Q+ ++ +        P  L  ++++ T G
Sbjct: 720  SRLGISVSQITNALYDAFGQRQISTIYTQASQYRVVLQSSDAATIGPQALESIHVKATDG 779

Query: 783  NVVPLETVANIKRTVGPLSIQHQQQQPSVTISFNLAPGTSLGQAVEEINAAAAEARVPDS 842
              V L  +A I++    L+I H  Q P+VT+SFNLA G SLG+AV+ I     +  +P  
Sbjct: 780  GQVRLSALARIEQRQAQLAISHIGQFPAVTLSFNLAHGASLGEAVQVIEQVQKDIGMPLG 839

Query: 843  VIPGFQGTAQVFQDSLSNQPLLILAAVVVIYIVLGVLYESFIHPITILSGLPSAGIGALL 902
            V   FQG A+ FQ SLS+  LLILAAVV +YIVLGVLYES+IHPITILS LPSA +GALL
Sbjct: 840  VQTRFQGAAEAFQASLSSTLLLILAAVVTMYIVLGVLYESYIHPITILSTLPSAAVGALL 899

Query: 903  TLMAAGMELSVIAIIGIIMLVGIVKKNAIMMIDVALE-RRRAGAAAQDAIREAALLRFRP 961
             L+ +G +L +IAIIGII+L+GIVKKNAIMMID ALE  R  G + +DAI +AALLRFRP
Sbjct: 900  ALLISGNDLGMIAIIGIILLIGIVKKNAIMMIDFALEAERNQGMSPRDAIYQAALLRFRP 959

Query: 962  IMMTTLAAIFGVLPIAIGAGAGSELRQPLGVAVVGGLLVSQLLTLFITPVVYLYLDRL 1019
            I+MTTLAA+FG +P+ +  G+G+ELRQPLG+ +VGGLLVSQ+LTLF TPV+YLY DRL
Sbjct: 960  ILMTTLAALFGAVPLMLATGSGAELRQPLGLVMVGGLLVSQVLTLFTTPVIYLYFDRL 1017