Pairwise Alignments

Query, 391 a.a., Multidrug resistance protein MdtA from Xanthobacter sp. DMC5

Subject, 421 a.a., Efflux pump periplasmic linker BepF from Xanthobacter sp. DMC5

 Score =  156 bits (394), Expect = 1e-42
 Identities = 123/381 (32%), Positives = 183/381 (48%), Gaps = 25/381 (6%)

Query: 14  GSAGRKMVLAVLFLALLGGGAWVWDKKPWLAASGQKAAPPPRVVAVLAGKAERTSLPVRV 73
           G+A    V  VL+     GGA     KP  AA     APP   V V     E+    +  
Sbjct: 34  GTAALLAVFGVLYGLPKEGGAHA--DKPAAAA-----APP--AVPVSVATVEQRDARLFD 84

Query: 74  EALGTVESMVTVPVRSRVAAAVEKVGFADGATVKEGDLLYQLDPRVIDAQILQAEATLNR 133
              G +E++  V VRSRVA A++ V F +GA V+EG+LL  +DP   +A + +AEA +  
Sbjct: 85  TFSGRLEAVERVEVRSRVAGAIKAVHFREGALVREGELLVSIDPEPYEADVAEAEAQVAS 144

Query: 134 DKVQLEKNLRDVERYAGLATRNAVSQVQVDDARTTADVQKAVVAQDEANLTALRVQRGYY 193
            + +L+    ++ER   L T   +SQ  +D+        +A +   +A L A ++   Y 
Sbjct: 145 VQARLDLARNELERGEKLFTTKTLSQSTLDERLNGQRAAEAGLRAAQAKLAAAKLNLSYT 204

Query: 194 EIRSPATGRIGVSSVRPGTVIRVD---DTLATVRQLAPIYVAFGLPE----RYIAGLRAA 246
           ++R+P +GR+G S +  G ++        L T+  + PIY +F   E    R +AGL   
Sbjct: 205 KVRAPVSGRVGKSEITVGNLVAAGPGAPVLTTLVSVDPIYASFSADEATVARALAGLGGG 264

Query: 247 KDA-------KVSFTIQGTGETISGGTVAVIDNTIEPQTGTLTARAIFPNADERLWPGAL 299
            D         V  T+  +G     G + ++DN ++P+TGT+  RA F N D RL PG  
Sbjct: 265 GDVADRLDQIPVLMTL-ASGVPPVEGVMQLVDNQVDPRTGTVRVRARFSNPDGRLLPGQF 323

Query: 300 GAVTVTLRIEDNVVAVPSEAVQNGQDGPFVFIVDDGIAHV-RPVTVTRTVDGRSVIAKGL 358
             + +        V V   AV   QD  FVF+VD     V R VT+   VDG  V+  GL
Sbjct: 324 VRLEMGQPKAAPAVLVSERAVGTDQDKKFVFVVDASNKAVWREVTLGAPVDGLRVVTNGL 383

Query: 359 DGGETVVTDGQLSLREGSRVS 379
             GE VV +G   +R G+ V+
Sbjct: 384 AAGERVVVNGLHRVRPGAAVT 404