Pairwise Alignments

Query, 391 a.a., Multidrug resistance protein MdtA from Xanthobacter sp. DMC5

Subject, 388 a.a., RND transporter MFP subunit from Pseudomonas simiae WCS417

 Score =  189 bits (481), Expect = 9e-53
 Identities = 130/377 (34%), Positives = 198/377 (52%), Gaps = 24/377 (6%)

Query: 18  RKMVLAVLFLALLGGGAWVWDKKPWLAASGQKAAP---PPRVVAVLAGKAERTSLPVRVE 74
           RK  L    L +L   AW   +     A  + AAP   P RVV+V      +  +P  V 
Sbjct: 5   RKTALIAGVLVVLAVAAWALTRP----AKSKLAAPTAIPVRVVSVA-----QQDIPRFVS 55

Query: 75  ALGTVESMVTVPVRSRVAAAVEKVGFADGATVKEGDLLYQLDPRVIDAQILQAEATLNRD 134
            +G+V S+ +V +R +V   + K+   +G  VK GDLL  +D R I A + QA+A L   
Sbjct: 56  GIGSVLSLHSVVIRPQVDGILTKLLVKEGQLVKAGDLLATIDDRSIRASLDQAKAQLGES 115

Query: 135 KVQLEKNLRDVERYAGLATRNAVSQVQVDDARTTADVQKAVVAQDEANLTALRVQRGYYE 194
           + QL+  L +++RY  L+  + VS+   D  +   +  KA    ++A + + +VQ  Y +
Sbjct: 116 QAQLQVALVNLKRYKALSVDDGVSKQTYDQQQALVNQLKATAQGNQAAIDSAQVQLSYTQ 175

Query: 195 IRSPATGRIGVSSVRPGTVIRVDDT--LATVRQLAPIYVAFGLPERYI--------AGLR 244
           IRSP +GR+G+ +V  G  +R  D   L +V Q+ PI V F LP++ +        A  +
Sbjct: 176 IRSPVSGRVGIRTVDEGNFLRTSDAQGLFSVTQIDPIAVEFSLPQQMLPTLQGLIAAPTQ 235

Query: 245 AAKDAKVSFTIQG-TGETISGGTVAVIDNTIEPQTGTLTARAIFPNADERLWPGALGAVT 303
           A+ DA +     G TG+ +  G +++IDN I   TGTL A+A F NA +RLWPG L  + 
Sbjct: 236 ASVDAYLGADTDGQTGDLLGEGHLSLIDNQISSTTGTLRAKAEFNNASQRLWPGQLVTIK 295

Query: 304 VTLRIEDNVVAVPSEAVQNGQDGPFVFIVDDGIAHVRPVTVTRTVDGRSVIAKGLDGGET 363
           +   ++ N + VP   VQ G D  FV+ V+     V PV VT   D    I KG+  G+ 
Sbjct: 296 IQTALDKNALVVPPTVVQRGLDSHFVYRVNGDKVDVVPVQVTYQ-DSDVNIIKGVQAGDV 354

Query: 364 VVTDGQLSLREGSRVSV 380
           +V+DGQ  L+ G++V V
Sbjct: 355 LVSDGQSRLKAGAQVEV 371