Pairwise Alignments

Query, 391 a.a., Multidrug resistance protein MdtA from Xanthobacter sp. DMC5

Subject, 433 a.a., secretion protein HlyD from Pseudomonas simiae WCS417

 Score =  176 bits (446), Expect = 1e-48
 Identities = 123/396 (31%), Positives = 194/396 (48%), Gaps = 32/396 (8%)

Query: 2   PAENAPGSAKSGGSAGRKMVLAVLFLALLGGGAWVWDKKPWLAASGQKAAPPPRVVAVLA 61
           P  +  G+ K  G AG+  ++   F                    G     P RV   + 
Sbjct: 35  PGSHKDGAEKPAGHAGKTGMMRPGF-------------------GGSTGPVPVRVAPAVL 75

Query: 62  GKAERTSLPVRVEALGTVESMVTVPVRSRVAAAVEKVGFADGATVKEGDLLYQLDPRVID 121
           G+      PV  +ALGTV ++ T+ VRSRV   + K+ F +G  VK GDLL ++DPR   
Sbjct: 76  GE-----FPVYYKALGTVTALNTINVRSRVGGELVKIAFEEGQMVKAGDLLAEIDPRSYQ 130

Query: 122 AQILQAEATLNRDKVQLEKNLRDVERYAGLATRNAVSQVQVDDARTTADVQKAVVAQDEA 181
             +LQA+ TL +++ QL+    DV+RY  L  ++++++  +D A       +  V  ++ 
Sbjct: 131 NALLQAQGTLMQNQAQLKNAQVDVQRYRDLYAQDSIAKQTLDTAEALVLQYQGTVKTNQG 190

Query: 182 NLTALRVQRGYYEIRSPATGRIGVSSVRPGTVIRVDDT--LATVRQLAPIYVAFGLPER- 238
            +   ++   + +IR+P +GR+G+  V  G ++  +DT  LA + Q  PI VAF LPE  
Sbjct: 191 AVDDAKLNLEFTKIRAPISGRVGLRQVDVGNLVAANDTTFLAVITQTQPISVAFTLPENT 250

Query: 239 ---YIAGLRAAKDAKVSFTIQGTGETISGGTVAVIDNTIEPQTGTLTARAIFPNADERLW 295
               +    A     V    +G  +  + G +  +DN I+  TGTL  +A F N D+ L+
Sbjct: 251 LETVLTRYHAGNKLPVEAWDRGDVKQQAVGVLQSLDNQIDVTTGTLKFKARFDNKDQALF 310

Query: 296 PGALGAVTVTLRIEDNVVAVPSEAVQNGQDGPFVFIVD-DGIAHVRPVTVTRTVDGRSVI 354
           P     V +      NVV  PS A+Q G  G FV+++D D    V+P+ V  T    +VI
Sbjct: 311 PNQFVNVHLLADTLHNVVLAPSAAIQFGNTGTFVYVLDGDKKVKVQPLVVGDTDGDNTVI 370

Query: 355 AKGLDGGETVVTDGQLSLREGSRVS-VRTRTAVPAT 389
            +GL  G+ VV +G   L++GS +  V   + VP T
Sbjct: 371 KEGLKAGDRVVLEGTDRLKDGSEIEVVNDSSEVPTT 406