Pairwise Alignments

Query, 391 a.a., Multidrug resistance protein MdtA from Xanthobacter sp. DMC5

Subject, 380 a.a., RND transporter from Pseudomonas simiae WCS417

 Score =  136 bits (342), Expect = 1e-36
 Identities = 99/355 (27%), Positives = 168/355 (47%), Gaps = 17/355 (4%)

Query: 43  LAASGQKAAPPPRV--VAVLAGKAERTSLPVRVEALGTVESMVTVPVRSRVAAAVEKVGF 100
           L+A G  AA  P +    V     E   L +  E  G + +     VR+RVA  V +  F
Sbjct: 18  LSACGDSAAEAPEMPLAKVRVETLEAKPLAITSELSGRIAAPRIAEVRARVAGVVMQRVF 77

Query: 101 ADGATVKEGDLLYQLDPRVIDAQILQAEATLNRDKVQLEKNLRDVERYAGLATRNAVSQV 160
            +G  VK+GD+L+++DP    A +  A+A L++ +    K     +RY+ L   NA+S  
Sbjct: 78  KEGHDVKQGDVLFRIDPAPFKADLDSAQANLSKAEADAFKARLQEQRYSQLVEGNAISGQ 137

Query: 161 QVDDARTTADVQKAVVAQDEANLTALRVQRGYYEIRSPATGRIGVSSVRPGTVIRVDDT- 219
             D+AR       A VA ++A +   R+  GY  + +P +GRIG + V  G ++  ++  
Sbjct: 138 DYDNARAAVRQTNAEVAANKAAVERARLNLGYATVTAPISGRIGRALVTEGALVGQNEAT 197

Query: 220 -LATVRQLAPIYVAFGLPERYIAGLRAA----------KDAKVSFTIQGTGETIS-GGTV 267
            LA ++QL PI+       R +  LR A          +D   +  I+  G      G +
Sbjct: 198 PLALIQQLDPIHADLTQSTRELNDLRRAFRAGSLKQVGQDQAKATLIEDDGSLYPLPGKL 257

Query: 268 AVIDNTIEPQTGTLTARAIFPNADERLWPGALGAVTVTLRIEDNVVAVPSEAVQNGQDG- 326
              + +++P TG +  R+ FPN D  L PG+   V +   ++   ++VP  A+     G 
Sbjct: 258 LFAEISVDPGTGQIILRSEFPNPDLDLLPGSFVRVRLEQAVDKQGISVPQRAITRDSAGI 317

Query: 327 PFVFIVDDG-IAHVRPVTVTRTVDGRSVIAKGLDGGETVVTDGQLSLREGSRVSV 380
           P V ++D G     +PV +   ++ R +++ GL  G+ ++ +G    R G +V V
Sbjct: 318 PMVLLLDAGQTVSQQPVELGAVINDRWIVSSGLKPGDRIIVEGLQHARPGEKVEV 372