Pairwise Alignments

Query, 391 a.a., Multidrug resistance protein MdtA from Xanthobacter sp. DMC5

Subject, 384 a.a., antibiotic transporter from Pseudomonas simiae WCS417

 Score =  124 bits (312), Expect = 3e-33
 Identities = 103/377 (27%), Positives = 166/377 (44%), Gaps = 41/377 (10%)

Query: 20  MVLAVLFLALLGGGAWVWDKKPWLAASGQKAAPPPRVVAVLAGKAERTSLPVRVEALGTV 79
           +V AV   +LL G               ++AAPP ++  V     +  +  +  E  G  
Sbjct: 10  LVTAVALASLLSG------------CKKEEAAPPAQIPQVGVVTIQPQAFTLTSELPGRT 57

Query: 80  ESMVTVPVRSRVAAAVEKVGFADGATVKEGDLLYQLDPRVIDAQILQAEATLNRDKVQLE 139
            +     VR +V   + K  F +G  VKEG  LYQ+DP V +A +  A+A+L +      
Sbjct: 58  TAYRIAEVRPQVNGIILKRLFKEGGDVKEGQQLYQIDPSVYEATLKSAQASLTQ-----S 112

Query: 140 KNLRDVERYAGLATRNAVSQVQVDDARTTADVQKAVVAQDEANLTALRVQRGYYEIRSPA 199
           K++ D  RY  L    AVS+ + D A        A     EAN+   ++   Y ++ +P 
Sbjct: 113 KSISD--RYKQLVDEQAVSRQEYDTA-------VANRMTSEANVQTAQINVRYTKVFAPI 163

Query: 200 TGRIGVSSVRPGTVIR--VDDTLATVRQLAPIYVAFGLPERYIAGLR-----------AA 246
           +GRIG SSV  G ++     D +A ++QL PIYV        +  LR             
Sbjct: 164 SGRIGRSSVTEGALVSNGQADAMAVIQQLDPIYVDVTQSSAEMLKLRRDLASGQLEKAGD 223

Query: 247 KDAKVSFTIQGTGETISGGTVAVIDNTIEPQTGTLTARAIFPNADERLWPGALGAVTVTL 306
             AKV  T++        G +   + +++  TG++T RA+FPN D  L PG      +  
Sbjct: 224 NAAKVKLTLEDGSAYGVDGKLEFSEVSVDQTTGSVTLRAVFPNPDHTLLPGMFVHAQLQA 283

Query: 307 RIEDNVVAVPSEAVQNGQDG-PFVFIVD-DGIAHVRPVTVTRTVDGRSVIAKGLDGGETV 364
            +    +  P + V     G P   +V+ D     R +   RT     ++ KGL+ G+ V
Sbjct: 284 GVNSKAILAPQQGVTRDLKGTPTALVVNADNKVEQRELVANRTYGAYWLVEKGLNAGDRV 343

Query: 365 VTDGQLSLREGSRVSVR 381
           +T+G   ++ G+ V V+
Sbjct: 344 ITEGLQYVKPGAEVKVK 360