Pairwise Alignments

Query, 391 a.a., Multidrug resistance protein MdtA from Xanthobacter sp. DMC5

Subject, 416 a.a., efflux RND transporter periplasmic adaptor subunit from Variovorax sp. OAS795

 Score =  151 bits (382), Expect = 3e-41
 Identities = 118/381 (30%), Positives = 189/381 (49%), Gaps = 40/381 (10%)

Query: 42  WLAASGQKA--APPPRVVAVLAGKAERTS-------LPVRVEAL------------GTVE 80
           W A +G  A  A    V+ + + KAE T+        PV V A+            G +E
Sbjct: 17  WPAVTGLTAVLAVAAAVLGMHSFKAEATAPAAAQQGTPVSVAAVASSEINAWDEFSGRLE 76

Query: 81  SMVTVPVRSRVAAAVEKVGFADGATVKEGDLLYQLDPRVIDAQILQAEATLNRDKVQLEK 140
           ++  V VRSRVA AV+ V F +GA VK+GDLL  +DP    A++ +AEA +   + +   
Sbjct: 77  AVQRVDVRSRVAGAVQAVHFREGALVKQGDLLITIDPAPYAAEVERAEAQVASAQARQAF 136

Query: 141 NLRDVERYAGLATRNAVSQVQVDDARTTADVQKAVVAQDEANLTALRVQRGYYEIRSPAT 200
           +  + ER   L  + A++Q + D+    +    A +   +A+L + R+  GY ++R+P +
Sbjct: 137 SRSEQERAKRLWDQQAIAQREYDERVNASREADANLRASQASLQSARLNLGYTQVRAPVS 196

Query: 201 GRIGVSSVRPGTVIRVD---DTLATVRQLAPIYVAFGLPERYIAGLRAAKDAKVSFTIQG 257
           GRIG   V  G ++        L T+  ++PIY +F   E+ I   RA KD     + +G
Sbjct: 197 GRIGKLEVTVGNLVAAGPGAPVLTTLVSVSPIYASFDADEQVIT--RALKDLPSGASARG 254

Query: 258 TGETI------SG-------GTVAVIDNTIEPQTGTLTARAIFPNADERLWPGALGAVTV 304
             E+I      SG       G + +IDN ++ ++GT+  RA F N D  L PG    + +
Sbjct: 255 QIESIPVQMGTSGFDGTPFIGKLQLIDNQVDARSGTVRVRASFDNKDGALIPGQFARIRM 314

Query: 305 TLRIEDNVVAVPSEAVQNGQDGPFVFIV-DDGIAHVRPVTVTRTVDGRSVIAKGLDGGET 363
                D  + V   A+   Q+  FV +V +D  A  R VT+  +++G  V++KGL  G+ 
Sbjct: 315 GQARNDTALLVSERAIGTDQNKKFVMVVGEDNKAMYREVTLGASINGLRVVSKGLKAGDR 374

Query: 364 VVTDGQLSLREGSRVSVRTRT 384
           VV +G   +R G+ V  +T T
Sbjct: 375 VVVNGLQHIRPGALVVPQTVT 395