Pairwise Alignments

Query, 391 a.a., Multidrug resistance protein MdtA from Xanthobacter sp. DMC5

Subject, 415 a.a., multidrug efflux RND transporter subunit MdtA from Escherichia coli ECRC62

 Score =  168 bits (426), Expect = 2e-46
 Identities = 107/343 (31%), Positives = 173/343 (50%), Gaps = 7/343 (2%)

Query: 45  ASGQKAAPPPRVVAVLAGKAERTSLPVRVEALGTVESMVTVPVRSRVAAAVEKVGFADGA 104
           A G++      +  V A  A   ++P  +  LGT+ +  TV VRSRV   +  + F +G 
Sbjct: 48  AGGRRGMRSGPLAPVQAATAVEQAVPRYLTGLGTITAANTVTVRSRVDGQLMALHFQEGQ 107

Query: 105 TVKEGDLLYQLDPRVIDAQILQAEATLNRDKVQLEKNLRDVERYAGLATRNAVSQVQVDD 164
            VK GDLL ++DP      + QA+  L +DK  L    RD+ RY  LA  N VS+ ++D 
Sbjct: 108 QVKAGDLLAEIDPSQFKVALAQAQGQLAKDKATLANARRDLARYQQLAKTNLVSRQELDA 167

Query: 165 ARTTADVQKAVVAQDEANLTALRVQRGYYEIRSPATGRIGVSSVRPGTVIRVDDT--LAT 222
            +      +  +  DEA++ + ++Q  +  I +P  GR+G+  V  G  I   DT  +  
Sbjct: 168 QQALVSETEGTIKADEASVASAQLQLDWSRITAPVDGRVGLKQVDVGNQISSGDTTGIVV 227

Query: 223 VRQLAPIYVAFGLPERYIAGLRAAKDAKVSFTIQGTGET----ISGGTVAVIDNTIEPQT 278
           + Q  PI + F LPE  IA +  A+ A     ++    T    +S GT+  +DN I+  T
Sbjct: 228 ITQTHPIDLVFTLPESDIATVVQAQKAGKPLVVEAWDRTNSKKLSEGTLLSLDNQIDATT 287

Query: 279 GTLTARAIFPNADERLWPGALGAVTVTLRIEDNVVAVPSEAVQNGQDGPFVFIVDDGIAH 338
           GT+  +A F N D+ L+P       + +  E N V +P+ A+Q G +G FV++++     
Sbjct: 288 GTIKVKARFNNQDDALFPNQFVNARMLVDTEQNAVVIPTAALQMGNEGHFVWVLNSENKV 347

Query: 339 VRPVTVTRTVDGRSVIAK-GLDGGETVVTDGQLSLREGSRVSV 380
            + +      D + V+ + G+  G+ VVTDG   L EG++V V
Sbjct: 348 SKHLVTPGIQDSQKVVIRAGISAGDRVVTDGIDRLTEGAKVEV 390