Pairwise Alignments

Query, 391 a.a., Multidrug resistance protein MdtA from Xanthobacter sp. DMC5

Subject, 368 a.a., RND family efflux transporter, MFP subunit from Echinicola vietnamensis KMM 6221, DSM 17526

 Score =  134 bits (338), Expect = 3e-36
 Identities = 96/318 (30%), Positives = 159/318 (50%), Gaps = 20/318 (6%)

Query: 77  GTVESMVTVPVRSRVAAAVEKVGFADGATVKEGDLLYQLDPRVIDAQILQAEATLNRDKV 136
           GTV  +  + +R +V+  + K+   DG  V +G  LY++D     A   QA+ATL   K 
Sbjct: 55  GTVVPLNEIEIRPQVSGYINKIFVEDGQEVAKGQKLYEIDRSKYQAAYEQAQATLKSAKA 114

Query: 137 QLEKNLRDVERYAGLATRNAVSQVQVDDARTTADVQKAVVAQDEANLTALRVQRGYYEIR 196
            LE+  +D+ RY  L  + A+++ Q+D A+      ++ V+  EA + +      Y  I 
Sbjct: 115 NLERVKKDLARYEALDKQEAIAKQQLDYAKADILTAESQVSSAEAQVRSTLTDYNYSVIT 174

Query: 197 SPATGRIGVSSVRPGTVIRVDDTLA-TVRQLAPIYVAFGLPERYIAGLRAAKDAK----- 250
           +P +G +G+S VR G  +    +L  T+    P+ V F + ER +   R +K  K     
Sbjct: 175 APFSGTVGISQVRLGAQVSAGQSLLNTLSSNDPVLVDFVVNERDVR--RFSKMMKNESLP 232

Query: 251 -VSFTIQGTGETI--SGGTVAVIDNTIEPQTGTLTARAIFPNADERLWPGALGAVTVTLR 307
             +FTIQ     +    G +  ID  +  Q+GT+  R  FPN D  L PG    +T+ LR
Sbjct: 233 DSTFTIQFGENDVYRHHGELTTIDRAVGRQSGTINMRVEFPNPDRELIPG----MTLNLR 288

Query: 308 IED----NVVAVPSEAVQNGQDGPFVFIV-DDGIAHVRPVTVTRTVDGRSVIAKGLDGGE 362
           + +    + +A+P +AV       FV++V DD + H + V +   V    V+ +GL  G+
Sbjct: 289 VLNQDIGDQIAIPFKAVTEQMGEYFVYVVGDDSVVHQQNVQLGTKVGAEIVVREGLKPGQ 348

Query: 363 TVVTDGQLSLREGSRVSV 380
            +V +G   LREG++V +
Sbjct: 349 KIVVEGIQKLREGAKVQI 366