Pairwise Alignments

Query, 298 a.a., High-affinity branched-chain amino acid transport system permease protein LivH from Xanthobacter sp. DMC5

Subject, 304 a.a., High-affinity branched-chain amino acid transport system permease protein BraD from Pseudomonas putida KT2440

 Score =  126 bits (317), Expect = 5e-34
 Identities = 90/297 (30%), Positives = 154/297 (51%), Gaps = 15/297 (5%)

Query: 6   FFQLLVSGIAMGAIYTLTAKGLFITHLATHRLNFGQGDFLMVGAFA---SIGMLTA-GVP 61
           F Q LV+G+ +G++Y L A G  + +     +NF  G+  M+ A+    S+ +L   GV 
Sbjct: 5   FLQQLVNGLTLGSVYGLIAIGYTMVYGIIGMINFAHGEVYMISAYLAAISLALLAYFGVE 64

Query: 62  A-PLAVLGVL----VLMGVLGYLLERFAIRPLDRLGDRAGAYSWVLTTAGAALILQNIVE 116
           + PL +LG L    V+ GV G+ +ER A +PL R   R      +++  G +LILQN  +
Sbjct: 65  SFPLLMLGTLLFTIVVTGVYGFTIERIAYKPL-RNSTRLAP---LISAIGISLILQNYAQ 120

Query: 117 LGFGKSAQYAPPLFSKTRDNVISILGVGIFFEEAAIIITAFIVVGAFYWFLFGSRWGKAV 176
           +  G   Q  P L        +    V + + +  I++ AF+ +G   + +  ++ G+  
Sbjct: 121 ISQGARQQGVPTLLEGAMRVEVGSGFVQLTYTKIFILVAAFVGMGLLTYVIKYTKLGRMC 180

Query: 177 YAVAFNPEAASLFGIDVRGVVVLVFVLAALMAGISGVLVGPLVSVHP-HMGLIFTIKALA 235
            A   + + AS+ GI+   V+  VFV+ A+MA ++GVL+         + G I  IKA  
Sbjct: 181 RATQQDRKMASILGINTDRVISYVFVIGAVMAALAGVLITMNYGTFDFYAGFIIGIKAFT 240

Query: 236 VAAVGGFTNPVGILLGGLLFGVAEA-FSNYWDSAFGDLYPLLFVMALLAVRPSGLFG 291
            A +GG  +  G +LGG++ G++E+ FS   +S + D++    ++ +L  RP GL G
Sbjct: 241 AAVLGGIGSLPGAMLGGIILGISESLFSGLINSDYKDVFSFSLLVMILIFRPQGLLG 297