Pairwise Alignments

Query, 408 a.a., Multidrug resistance protein MdtH from Xanthobacter sp. DMC5

Subject, 464 a.a., transporter of an unknown substrate from Pseudomonas putida KT2440

 Score = 92.4 bits (228), Expect = 2e-23
 Identities = 119/417 (28%), Positives = 187/417 (44%), Gaps = 45/417 (10%)

Query: 7   TGQERRAGAGLDRPAIPRTVWALGLVSMFMDISSEMIHALLPLFLTGTL---GASVAMVG 63
           +G E RA  GL        V+A  ++ MFM         +LP+  T  +   GA+ A++G
Sbjct: 10  SGGETRAAGGL------ALVFAFRMLGMFM---------VLPVLATYGMDLAGATPALIG 54

Query: 64  LIEGIGESTAQVVKVFSGYLSDRFGRRKPLILLGYGLGAASKPFFAIAGAPGMVLAARFA 123
           L  G    T  V+++  G +SDR GRR P+I LG  + A      A A +   V+A R  
Sbjct: 55  LAIGAYGLTQAVLQIPFGMISDRIGRR-PVIYLGLVIFALGSVLAAQADSIWGVIAGRIL 113

Query: 124 DRVGKGMRGAPRDALVADVTPSEIRGRAY---GLRQALD-TVGAFVGPLL--AIVLMALF 177
              G G   A   AL++D+T  + R +A    G+   L   V   VGPLL  A  L  LF
Sbjct: 114 Q--GAGAISAAVMALLSDLTREQHRTKAMAMIGMSIGLSFAVAMVVGPLLTSAFGLSGLF 171

Query: 178 ADDMRVVFWIALVPGILAVVCVVAG----VEDRAAGVAEGDRPPPVRLKDLKRLGRAFWG 233
                V   +ALV GIL +  VV      ++ R +GVA     P +R  DL RL  + + 
Sbjct: 172 L----VTAGLALV-GILLIAFVVPSTHSILQHRESGVARQAIGPTLRHPDLLRLDVSIFI 226

Query: 234 VVAVGVVFTLARFSEAFLVLKAHDEGLPLVLAPLVLVAMNVVYSLGAYPAGAWSDRAPP- 292
           + AV ++ +      AF+       GLP      V +    +      P   + ++    
Sbjct: 227 LHAV-LMASFVALPLAFV----ERGGLPKEQHWWVYLTALFISFFAMVPFIIYGEKKRKM 281

Query: 293 QRLLFGGLVLLIAADIVL-AFGPGLPGAFLGIILWGGHMALTQGLLAKLVAEHAPAALRG 351
           +R+L G + +L+  +I    +  GL G  +G +++     L +  L  LV++ +PA  +G
Sbjct: 282 KRVLAGAVSVLLLTEIYFWEWADGLRGLVIGTVVFFTAFNLLEASLPSLVSKVSPAGGKG 341

Query: 352 SAFGLFNLATGLATLAASLAAGLLWDAGGARATFIAGAVFAFLASALVIALAGGREP 408
           +A G+++ +  L      +  G L+  GG    F+  AV    A  L++AL     P
Sbjct: 342 TAMGVYSTSQFLGAALGGILGGWLFQHGGLNTVFLGSAVLC--AIWLIVALRMNEPP 396