Pairwise Alignments

Query, 578 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 260 a.a., putative Nitrate ABC transporter, permease protein from Pseudomonas putida KT2440

 Score = 68.9 bits (167), Expect = 2e-16
 Identities = 56/184 (30%), Positives = 84/184 (45%), Gaps = 16/184 (8%)

Query: 374 GLTMLRVIVLIALATLIWVPIGVWIGLRPAWAE-RVQPMAQFLAAFPANIIFPFAVVAIV 432
           G ++ RV    A A L+ V +G+ IG R  WAE  + P  + L   PA    P A++   
Sbjct: 64  GSSLARVFAGYATAALVGVALGLLIG-RSKWAEDTLLPPLEVLRPIPAVAWIPLAILMF- 121

Query: 433 RLGLDPDIWLSPLMVL--GTQWYILFNVVAGASAFPNDLREAAGTFRIRGWSWWKKVMLP 490
                P   LS + +   G  + IL N V G  A    L  +A +     W+  ++V+LP
Sbjct: 122 -----PSSELSMVFITFTGALFPILLNTVHGVEAVDPRLVASARSLGAGRWAILREVVLP 176

Query: 491 GIFPYYVTGAITASGGSWNASIVAEVASWGDTTLRAHGIGAYIADATAAGDYPRIVLGIA 550
           G  P  VTG     G SW   + AE+ S         GIG Y  ++    +YP IV+G+ 
Sbjct: 177 GALPSIVTGLAIGMGTSWFCLVTAEMIS------GQFGIGYYTWESYTLQNYPDIVVGML 230

Query: 551 VMSI 554
           ++ +
Sbjct: 231 LIGV 234



 Score = 60.5 bits (145), Expect = 8e-14
 Identities = 50/209 (23%), Positives = 91/209 (43%), Gaps = 16/209 (7%)

Query: 46  PLAALDQTPVSLDPAQLPEYALRTTLRMLAAILASLVFTFLYGALAAKSRRAEMVLIPML 105
           P A LD     L  + L  +   +  R+ A    + +     G L  +S+ AE  L+P L
Sbjct: 43  PKAVLDAAWQLLTSSTLLAHLGSSLARVFAGYATAALVGVALGLLIGRSKWAEDTLLPPL 102

Query: 106 DILQSVPVLGFLSFTVVGFMSLFPGKVLGVELAAIFAIFTSQAWNMTFSFYQSLKTVPRD 165
           ++L+ +P + ++   ++    +FP      EL+ +F  FT   + +  +    ++ V   
Sbjct: 103 EVLRPIPAVAWIPLAIL----MFPSS----ELSMVFITFTGALFPILLNTVHGVEAVDPR 154

Query: 166 LDEATRSFRLTGWQRFWRLEVPFSMPGLVWNTMMSMSGGWFFVVASEAISVGDTTITLPG 225
           L  + RS     W     + +P ++P +V    + M   WF +V +E IS G       G
Sbjct: 155 LVASARSLGAGRWAILREVVLPGALPSIVTGLAIGMGTSWFCLVTAEMIS-GQF-----G 208

Query: 226 VGSYVALAIKEQNLP--AVGWAVLAMLAV 252
           +G Y   +   QN P   VG  ++ +L +
Sbjct: 209 IGYYTWESYTLQNYPDIVVGMLLIGVLGM 237