Pairwise Alignments

Query, 307 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 339 a.a., Branched-chain amino acid ABC transporter, permease protein from Pseudomonas putida KT2440

 Score =  110 bits (274), Expect = 6e-29
 Identities = 86/296 (29%), Positives = 141/296 (47%), Gaps = 14/296 (4%)

Query: 13  VALVLAATLMVRDAYVASVINLIAVAALTAVSLRFVMLMGELNFATAAFVGIGAYTTGAA 72
           VA ++A  L++  A +A+ I + A+AAL    L  +   G L+F    F G+GAY     
Sbjct: 22  VASLVALPLLLPSATLATEILIFAMAALACNLL--LGYTGLLSFGQGIFFGVGAYGAALL 79

Query: 73  VTILQWPFLIAILAGGLMAGLVAVAFGYVTLRTKGPYFLLIGFAFTEAVRIL-YSKSTTL 131
           +  LQW    A+L   +    +A+  G + +R  G YF+++  AF++    L Y+ S   
Sbjct: 80  MIHLQWGMFAALLGAAVFGAFLALLVGALAIRRTGIYFVMLTLAFSQMAYFLAYTLSGWT 139

Query: 132 GGTSGMVGIFPP-------VALDAWMPT---VIVGTSCALIFALYV-LERSDFGKILTAI 180
           GG +G++ +  P       V +D   P    V V     LIFA  + + RS FG  L AI
Sbjct: 140 GGDNGLLDVPRPNIEIAGHVLVDLADPRHFYVFVAVLFLLIFAAALRVIRSPFGSTLLAI 199

Query: 181 RDNENVARTVGLNILLVKIACFAAASVAAGVAGSLHAFANNVISPGDFSFLVAAFALAYV 240
           R+NE  A  +G +    KI  F  +    G+AG+L+A   +     +   +++   L   
Sbjct: 200 RENETRAAAIGYDTRHFKILVFMLSGAITGIAGALYAMLLHFAPLSNIDLMMSENILIMT 259

Query: 241 KVGGEDNIVGPLVGSVLLVVLGSYALGLGGDEHIFYGAAITLAVLLLPNGITGLLS 296
            VGG  ++ G L+G+  +V+LG     L     +  G  + L V+ +  G+ G L+
Sbjct: 260 IVGGTGSLFGSLLGAGAIVLLGDVLSELWPRWLMLLGVILILVVVFMRGGLWGGLT 315