Pairwise Alignments

Query, 291 a.a., High-affinity branched-chain amino acid transport system permease protein LivH from Xanthobacter sp. DMC5

Subject, 291 a.a., branched-chain amino acid ABC transporter permease from Magnetospirillum magneticum AMB-1

 Score =  124 bits (311), Expect = 2e-33
 Identities = 86/286 (30%), Positives = 132/286 (46%), Gaps = 3/286 (1%)

Query: 3   FATLLQAVISGLLLGGIYALVAMSLALVFGVMRVLNFAHGDLLMAGMYGIVILNHTFGIN 62
           FA  LQ + SGL  G IYAL  +  A+++    V+NFA G+ +M G      +    G+ 
Sbjct: 2   FAAFLQYLFSGLTSGAIYALAGLGFAIIYNASHVINFAQGEFIMIGGMATATMVAA-GVP 60

Query: 63  PYAAIILVAPVLALIGIAVYFVLIRRVLGAGPLMQAQVTLGLSFAIQSTALLVFGADLLN 122
            Y AI L      L+G+A+    I     A  +    +T+G S  ++  A L++  +  +
Sbjct: 61  IYLAIPLAMAASMLVGVAMEKFAIEPARNADVVTIIIITIGASIFMRGAAQLIWDKEFHS 120

Query: 123 VRTSLDGAAFRIAGVVVGKPELIGFLISIVVCAALTWFILSTEFGRRLRAVAQDPTMAIL 182
           +          + G  +    L  F IS V  A L +F   T FG+ +   + +   A L
Sbjct: 121 LPAFSGETPIAVMGATLMPQSLWVFGISAVAIALLWYFFNRTMFGKAMLGTSHNRLAAQL 180

Query: 183 CGIPVRSVQMIVFVGCTALLAVPAGCLMAFSQLTP-TAGIQYSLLSLMVVVLGGLGDLRG 241
            G+ V+ V +  F   +ALL    G ++     T   AGI   L      VLGGLG+  G
Sbjct: 181 VGVAVKRVLLASFA-LSALLGAVGGIVVTPITFTNYEAGIMLGLKGFSAAVLGGLGNGTG 239

Query: 242 AFVGGLLIGIVEAVTSALFSNPAAPGIIYLVFGLALLARPRGLFGR 287
           A +GGL++GI EA+ S   S+     I +++    L   P GLFG+
Sbjct: 240 AIIGGLIVGIAEAMASGYLSSAYKDAIAFIIILFVLFFMPSGLFGK 285