Pairwise Alignments

Query, 301 a.a., HTH-type transcriptional regulator HdfR from Xanthobacter sp. DMC5

Subject, 316 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

 Score =  211 bits (538), Expect = 1e-59
 Identities = 117/295 (39%), Positives = 174/295 (58%), Gaps = 1/295 (0%)

Query: 1   MNWDYLRALIAVARGGTLSAAAKMLGVKHSTVSRHLAGLEAEIRTRLVVRA-PGGLTLTD 59
           +NWD L+  + VAR    S+AAK L V ++TVSR ++ LE  + T L  ++   G  LT 
Sbjct: 11  LNWDDLKFFLEVARTRKASSAAKRLSVDYTTVSRRISSLEGALGTLLFEKSRTNGFVLTA 70

Query: 60  AGLRLLEAAEAMELQAQTAQDEISGRDVSISGTVRIGAPDAFGAYFLSPRLTRLLDQNPA 119
            G RLL  AE++E     A +++SG  V++SG VR+G  + FG++F++P+L+  +D  PA
Sbjct: 71  EGQRLLGYAESIESTLHMACEQVSGSGVALSGHVRMGCTEGFGSFFITPQLSHFVDAYPA 130

Query: 120 LKVQLVATPRSFNLTKREADIAIALTMPERGRLVTRKMATYGLGVFASAAYLADKPAIRS 179
           + V ++  P   +L+KREADI IAL  PE G  V  K+  Y L ++A+  YL     IR 
Sbjct: 131 ISVDILPLPHFISLSKREADIVIALERPEHGPYVCCKLCDYRLRLYATQGYLDSHAPIRQ 190

Query: 180 VDDLRRHRFISYIDDLIFTRELDYLGEVATGIDAAFQSSNLFAQMHAARAGLGVCILPYF 239
           V DL +H FISY+DDL F+ EL YL  +     A  +S+++ AQ  AA  G G+ ILP F
Sbjct: 191 VTDLAKHPFISYVDDLAFSSELLYLANLIPNASAHLRSTSVIAQYTAALQGRGLAILPCF 250

Query: 240 LASGCPDLKLVLPDAVRLVRSWWIIVHEEQKNIARVRITADFITQELANEATLLM 294
           LA+  P L  VLP+ + + R +W+   E+ + + R+ +  D+I       A LLM
Sbjct: 251 LAAQDPRLVTVLPEEIEVTRQFWMYCREDLRKLKRITLLWDYIRGVTEANAPLLM 305