Pairwise Alignments

Query, 550 a.a., Long-chain-fatty-acid--CoA ligase from Xanthobacter sp. DMC5

Subject, 560 a.a., putative Long-chain-fatty-acid-CoA ligase from Pseudomonas putida KT2440

 Score =  192 bits (489), Expect = 2e-53
 Identities = 168/537 (31%), Positives = 249/537 (46%), Gaps = 57/537 (10%)

Query: 43  VRYTWRMFAQRCRQLASALISAGIERGDTVSIFSLNTPAMLEAQFGIPLSGAVINCLNSR 102
           +RY+WR  A++    A ALI+ G+  GD V I+S N       Q      GA++  +N  
Sbjct: 44  LRYSWRQLAEQVEIYARALIALGVNTGDRVGIWSPNCAQWCILQLASAKVGAILVNINPA 103

Query: 103 LDAPAVAFILAHSEARIFLVDRQLAPVAQEALRLMEAPPRVIDIDDPSGADFPLLGDTEY 162
                + ++L  S  R +LV  +    +     + E  P +     P       L +   
Sbjct: 104 YRVGELEYVLRQSGCR-WLVCAEAFKTSDYHTMVQELVPELASAA-PGELASECLPELRG 161

Query: 163 ETFIAAGDPAAELRWP-------QDEWDA-------------IALNYTSGTTGDPKGVVY 202
              +AA  PA  L W        Q   +A             + + YTSGTTG PKG   
Sbjct: 162 VISLAANPPAGFLPWHAFAERAGQTSVEACTARQQSLQFDQPVNIQYTSGTTGAPKGATL 221

Query: 203 HHRGAYLNALGQIINGRMTG------ARPVYLWTLPLFHCNGWCFA-WALAAVGGTQICM 255
            H     N L    NG M G      AR   +  +PL+HC G   A       G T I  
Sbjct: 222 SH----YNILN---NGFMVGESLGLTARDRMVIPVPLYHCFGMVMANLGCITHGSTMIYP 274

Query: 256 RKV-SAEGMYQAISEHGVTLLCGAPIVLGFLADGAPSDWTPPAAPIRV-LSGGASPPAPV 313
                AE   +A++E   T+L G P +   + D  PS      + +R  +  GA+ P  V
Sbjct: 275 NDAFDAELTLRAVAEERATILYGVPTMFIAMLDH-PSRAHMDLSTLRSGIMAGATCPIEV 333

Query: 314 FKRLGELGF--EVVHLYGMTEMHGVTTLCEPQEAWDDLDIDERMKHVARQGVRAVLADEM 371
            +R+ +     EV   YGMTE   V+    P +     D++ R+  V R   +  L +++
Sbjct: 334 MRRVIDQMHMAEVQIAYGMTETSPVSLQTGPDD-----DLELRVTTVGR--TQPQLENKL 386

Query: 372 IVGDPLTLEPVPRDGQTIGEVFMRGNIAMKGYLKNPKATEEAF-AADWYHTGDLAVIHDD 430
           +  D      VPR    IGE+  RG   M GY  NP+AT +A   A W H+GDLAV+ + 
Sbjct: 387 VDADGCI---VPRG--EIGELCTRGYSVMLGYWDNPQATADAIDPAGWMHSGDLAVMDEQ 441

Query: 431 GYIEVKDRSKDIIISGGENISSIEVEEALYSHPWIAGAAVVAVPDPKWGETPCAVVELKP 490
           GY+ +  R+KD+II GGENI   E+EE  Y+HP +A A V+ +P  ++GE   A ++L P
Sbjct: 442 GYVRIVGRNKDMIIRGGENIYPRELEEFFYTHPAVADAQVIGIPCSRYGEEIVAWIKLHP 501

Query: 491 GAPGGITEADVIRYCRERLAAYKCPRHVLF-EPLVRTATGKLQKFRLRTHAAEQLAA 546
           G    + E     +C+ R+A +K PR++ F +    T TGK+QKFR+R  +  ++AA
Sbjct: 502 GHSATVEELQ--GWCKARIAHFKVPRYIRFVDEYPMTVTGKVQKFRMREISVAEIAA 556