Pairwise Alignments

Query, 550 a.a., Long-chain-fatty-acid--CoA ligase from Xanthobacter sp. DMC5

Subject, 540 a.a., AMP-binding domain protein from Pseudomonas putida KT2440

 Score =  593 bits (1530), Expect = e-174
 Identities = 291/538 (54%), Positives = 370/538 (68%), Gaps = 2/538 (0%)

Query: 3   SKYDVGLERRGANFRPLTPLHFLDRAAEVYPDRTAVIYGEVRYTWRMFAQRCRQLASALI 62
           S Y  GL     N   LTPL F++R A VY +  AVI+G +R  W+   QRCR+LASAL 
Sbjct: 2   SIYAQGLMPAAVNHVALTPLSFIERTAAVYGNYPAVIHGAIRRNWQETYQRCRRLASALA 61

Query: 63  SAGIERGDTVSIFSLNTPAMLEAQFGIPLSGAVINCLNSRLDAPAVAFILAHSEARIFLV 122
             GI RGDTV++   NTP MLEA FG+P++GAV+N LN RLDA A+AF+L H EA++ + 
Sbjct: 62  GRGIGRGDTVAVMLPNTPTMLEAHFGVPMTGAVLNTLNVRLDAEAIAFMLQHGEAKVLIT 121

Query: 123 DRQLAPVAQEALRLMEAPPRVIDIDDPSGADFPLLGDTEYETFIAAGDPAAELRWPQDEW 182
           DR+   V + AL L+E PP V+D+DDP   +   +   +YE  +  GDP     WP DEW
Sbjct: 122 DREFHAVIEGALALLEHPPLVVDVDDPEYGEGRAVSQLDYEALLNEGDPEFAWEWPDDEW 181

Query: 183 DAIALNYTSGTTGDPKGVVYHHRGAYLNALGQIINGRMTGARPVYLWTLPLFHCNGWCFA 242
            AI+LNYTSGTTG+PKGVVYHHRGAYLNALG  +   M G RPVYLWTLP+FHCNGWC+ 
Sbjct: 182 QAISLNYTSGTTGNPKGVVYHHRGAYLNALGNQMTWAM-GHRPVYLWTLPMFHCNGWCYP 240

Query: 243 WALAAVGGTQICMRKVSAEGMYQAISEHGVTLLCGAPIVLGFLADGAPSDWTPPAAPIRV 302
           W + A+ GT + +R+V  + +   I EH V+ LCGAPIVL  L +   +       P++ 
Sbjct: 241 WTITALAGTHVFLRRVDPQKILTLIREHKVSHLCGAPIVLNALVNMPEAAKAAIEHPVQA 300

Query: 303 LSGGASPPAPVFKRLGELGFEVVHLYGMTEMHGVTTLCEPQEAWDDLDIDERMKHVARQG 362
           +  GA+PPA V   + ++G +V H YG+TE++G  T+C   + WD L ++ER +  +RQG
Sbjct: 301 MVAGAAPPAKVIGAVEQMGIKVTHTYGLTEVYGPVTVCAWHDEWDALSLEERARIKSRQG 360

Query: 363 VRAVLADEMIVGDPLTLEPVPRDGQTIGEVFMRGNIAMKGYLKNPKATEEAFAADWYHTG 422
           VR    D ++V DP TL+PVPRDG T+GE+FMRGN  MKGYLKNP+AT EAF   W+HTG
Sbjct: 361 VRYPTLDGLMVADPQTLQPVPRDGDTLGEIFMRGNTVMKGYLKNPEATAEAFRGGWFHTG 420

Query: 423 DLAVIHDDGYIEVKDRSKDIIISGGENISSIEVEEALYSHPWIAGAAVVAVPDPKWGETP 482
           DLAV H DGYIE+KDR KDIIISGGENIS+IEVE+ALY H  +  AAVVA PD KWGETP
Sbjct: 421 DLAVWHADGYIEIKDRLKDIIISGGENISTIEVEDALYKHSAVLEAAVVARPDEKWGETP 480

Query: 483 CAVVELKPGAPGGITEADVIRYCRERLAAYKCPRHVLFEPLVRTATGKLQKFRLRTHA 540
           CA V LKPG      EAD+  +CRE LA +K P+ V+F  L +T+TGK+QK+ LR  A
Sbjct: 481 CAFVALKPGRE-DTREADITSWCREHLAGFKVPKTVVFGELPKTSTGKIQKYVLRDRA 537