Pairwise Alignments

Query, 402 a.a., hypothetical protein from Xanthobacter sp. DMC5

Subject, 400 a.a., Branched-chain amino acid ABC transporter, periplasmic amino acid-binding protein from Pseudomonas putida KT2440

 Score = 91.7 bits (226), Expect = 3e-23
 Identities = 98/407 (24%), Positives = 166/407 (40%), Gaps = 16/407 (3%)

Query: 1   MKSRILMGLAILLAATT-----AASAQAPKTVKIGVLNDQSGAYADMGGVGSVVAAQLAI 55
           M+ R L+   + L A       A  A A + +    L   SGA+A  G    +  ++LAI
Sbjct: 1   MQRRTLLKAGLALGALGSLPLGAHRAFADQPLTFYGLKSMSGAFASYGKYADM-GSRLAI 59

Query: 56  EDSGLKQKGWTIDVVSADHQNKADIAANVARGWFDVDGVDMITDVTNSAAALAVNQITRD 115
            +   +  G  +     D +  A  A    +     DG       T S++ALAV++    
Sbjct: 60  AEHP-QLLGHPLKYKVIDTEGNAGKAVRKVQEAIGQDGARFFQGCTLSSSALAVSKEIHK 118

Query: 116 KNKVMLASGPATSDLTGKACSPNTVHWTSDTWAFAHGTGQAIVKT--GGDTWFFLTADYA 173
              V +    A  ++TGK C+ +T  W+  T+     T   + +       W+ +T  Y 
Sbjct: 119 AGGVFMTPVGA-DEITGKDCNASTFRWSVPTYGAIRETLVPMSRQLPQAKRWYTITPQYV 177

Query: 174 FGQALERDTADVVEKNGGKVVGRVRVPLGTSDFSSFLVQAQGSKAKIVGLANSGADTTNS 233
           FG AL  +   V  + G + +G     L   +FS +L  A  +K  ++ L N G+  +N+
Sbjct: 178 FGDALLDNARKVFAELGVEHIGNSYHSLQEQEFSGYLTNAIAAKPDVLVLLNFGSQASNA 237

Query: 234 IKQAAEFGIVAGGQNLAGLLIYISDVHSMGLPVAQGLILTSPFYWDMNDKTRAFSQRFAE 293
           ++QA  FGI    + L      +     +G  V +G+ L + ++  ++            
Sbjct: 238 LRQAVNFGIKDRMKVLMVWSAGLDQFQELGSDVLEGVYLGAQYWHQVDTPLNKLLVAATR 297

Query: 294 KMRGAKPTMVQAGVYSATLNYLKTVAELGDAKDGRKVVDAMKAKPIKDPLFGEGRIR-AD 352
           K  G  P    A  Y  T   L+ + + G + DG  V  A++    + P  GE  IR  D
Sbjct: 298 KAYGINPNYPLAADYIGTKVMLEAIVKAG-SLDGAAVSAALQGMRFQGPT-GEELIRPGD 355

Query: 353 GRKIHDMYLFEVKKPAESKAPWDYYKLRATIPAEEAFRPLSQSECAL 399
            + + D YL   K   + +   D   L   I +  +F  +  + CAL
Sbjct: 356 HQVLKDYYLLRGKPQGQMR---DEDDLAEVISSGRSFVEVDHTGCAL 399