Pairwise Alignments

Query, 273 a.a., HTH-type transcriptional repressor NagR from Xanthobacter sp. DMC5

Subject, 249 a.a., histidine utilization repressor from Pseudomonas simiae WCS417

 Score = 72.4 bits (176), Expect = 9e-18
 Identities = 59/205 (28%), Positives = 94/205 (45%), Gaps = 10/205 (4%)

Query: 24  SPLPLYAQIKQRLIGLILKWDQGDR-RFFSDEQLCAMFSVSRDTARQAVAELVQEGLLTR 82
           SP PLYA++KQ +   IL  +     R  S+ +L +    SR T  +A+ EL  EGLL R
Sbjct: 17  SPAPLYARVKQMISQQILNGNWPPHYRVPSESELVSQLGFSRMTINRALRELTAEGLLVR 76

Query: 83  SRGLGTFVSVRKLEERFNPGMDFLNQWAATGMPMQATVLAFERIAADETIAAGLETEIGA 142
            +G+GTFV+  K +       +  ++ A+ G      V+     AA    A  LE   G 
Sbjct: 77  MQGVGTFVAEPKSQSALFEVHNIADEIASRGHRHTCQVIHLGEEAAGSERAVALEMREGG 136

Query: 143 KVLFIKRLRAAARVPLAIDYRYL-----PADLTADWTEEAVHGSPLHRLWQAVDLKTGDF 197
           +V     +     +P+ I+ R++     P  L  D+T++    +P   L Q   L  G+ 
Sbjct: 137 RVFHSLIVHFENDIPVQIEDRFVNALVAPEYLQQDFTQQ----TPYAYLNQVAPLTEGEH 192

Query: 198 TIEAGVAGPEEVEYLHLSKGAPVLI 222
            +EA +A   E + L +    P L+
Sbjct: 193 VVEAILADAAECKLLQIEPTEPCLL 217