Pairwise Alignments

Query, 396 a.a., Leu/Ile/Val-binding protein from Xanthobacter sp. DMC5

Subject, 372 a.a., ABC transporter, substrate binding protein (amino acid) from Agrobacterium fabrum C58

 Score = 87.0 bits (214), Expect = 8e-22
 Identities = 107/403 (26%), Positives = 178/403 (44%), Gaps = 56/403 (13%)

Query: 5   RRSFLKMVPAAALAATGTGTVAGLWSSAARAAEPLRVGSILSVTGPAAFLGEDMKAGLEL 64
           ++S L  V   A+ A G          +A A   + VG+ L  TGP A  G  ++ G E 
Sbjct: 2   KKSLLSAVALTAMVAFG---------GSAWADVVIAVGAPL--TGPNAAFGAQIQKGAEQ 50

Query: 65  AVDEFNAAGGMGGRKIEWTYYDAESQTQKGITATRRLISQDKVEVILSGGNMSGIALAMA 124
           A  + NAAGG+ G +I+    D  S  ++GI+   + ++ D V+ ++   N SG+++  +
Sbjct: 51  AAKDINAAGGINGEQIKIVLGDDVSDPKQGISVANKFVA-DGVKFVVGHFN-SGVSIPAS 108

Query: 125 PITNAAKVPFISSEGALAIVTPVAERQY--------VFKSTVDDGDVLERIADYL-DKKK 175
                     + +E  +  +TP A             F++   D         YL D  K
Sbjct: 109 E---------VYAENGILEITPAATNPVFTERGLWNTFRTCGRDDQQGGIAGKYLADHFK 159

Query: 176 IKKVALIADTSGFGQGAVGQMKIVGPKRGL-DVMYESFAPSDTDMMPQLTRIRDAGAEAI 234
             KVA+I D + +GQG   + K      G+ +VMYE     D D    ++++++AG  +I
Sbjct: 160 DAKVAIIHDKTPYGQGLADETKKAANAAGVTEVMYEGVNVGDKDFSALISKMKEAGV-SI 218

Query: 235 ICW--TVTPAGVVFLKQAQQLGLDKKTLIHSYGFVSADYMKLAGDAANTLLLASLKLPVG 292
           I W    T AG++ ++QA   GL K  L+   G VS +   +AGDA    L         
Sbjct: 219 IYWGGLHTEAGLI-IRQAADQGL-KAKLVSGDGIVSNELASIAGDAVEGTL--------- 267

Query: 293 DQLPDSDPLKAGILKLMKAYEARFKRPASIYAAESYDAALLAREALKKVGGDV--SKLSQ 350
           +       L+    +L++ ++A    P + Y   SY AA+ A     K  G V   K+++
Sbjct: 268 NTFGPDPTLRPENKELVEKFKAAGFNPEA-YTLYSY-AAMQAIAGAAKAAGSVEPEKVAE 325

Query: 351 GMEQIKDFPGISGVFTFSPERHSGLSKQDIVLVNWR---DGRF 390
            +++   FP   G  +F  +    L     V+  W+   DG+F
Sbjct: 326 ALKK-GSFPTALGEISFDEKGDPKL--PGYVMYEWKKGPDGKF 365