Pairwise Alignments

Query, 479 a.a., putative transport protein HsrA from Xanthobacter sp. DMC5

Subject, 511 a.a., multidrug efflux transport system - permease subunit from Pseudomonas putida KT2440

 Score =  144 bits (362), Expect = 9e-39
 Identities = 114/417 (27%), Positives = 203/417 (48%), Gaps = 22/417 (5%)

Query: 7   PPQVLIPLI-VACALFMEQVDSTVIATSLPAIAADLGEDPVALKLALTSYLLSLAVFIPA 65
           PP +L+  I ++ A FM+ +D+T+   +LP I+ +LG         +TS+ +S A+ +P 
Sbjct: 11  PPSLLLTTIGLSLATFMQVLDTTIANVALPTISGNLGVSYEQGTWVITSFAVSNAIALPL 70

Query: 66  SGWAADRYGARTVFRSAIVIFTIGSILCGLSSSLADFVLYRIIQGMGGAMMVPVGRLVIL 125
           +GW + R+G   +F  A ++F + S LCG++ S+ + V +R++QG+    + P+ + +++
Sbjct: 71  TGWLSRRFGEVKLFIWATLLFVLASFLCGIAQSMPELVGFRVLQGVVAGPLYPMTQTLLI 130

Query: 126 RSVPKSELVSSLAWLTIPALLGPVFGPPLGGFITTYFDWRLIFFINVPIGVLGVFLATRF 185
              P ++   +LA L +  ++ P+ GP LGG+IT  + W  IFFINVPI   G+F A   
Sbjct: 131 AVYPPAKRGMALALLAMVTVVAPIAGPILGGWITDSYSWPWIFFINVPI---GLFAAAVV 187

Query: 186 IENVREEDV----PPLDLKGL--ILSGAGLAGLVFGFAVLGQEVLVPQWAAVAIGA-TGA 238
            + +R   V     P+D  GL  ++ G G   +V      G ++   + + + +G+    
Sbjct: 188 RQQMRTRPVVTSRQPMDYIGLLTLIIGVGALQVVLD---KGNDLDWFESSFIIVGSLISV 244

Query: 239 FFLFLYVRHARVTPHAVLDLKLLRHGTFRAG---VVGGSLFRVGIGAMPFLLPLMLQLSF 295
            FL ++V       H V++L+L  H  FR G   +VGG     G   +  +LP  LQ   
Sbjct: 245 VFLAVFVIWELTDRHPVVNLRLFVHRNFRIGTIVLVGG---YAGFFGINLILPQWLQTQM 301

Query: 296 GLSPFASGLLTFTASAGAMAMKFTAARLLRRIGYKRVLLANVFLCSGFIA-INATFTPLT 354
           G +   +GL         + M     +   R    RVL    FL  G    + A FT   
Sbjct: 302 GYTATWAGLAVAPIGLLPVIMSPFVGKYAHRFDL-RVLAGLAFLAIGTSCYMRAGFTSEV 360

Query: 355 PHWLIASLLLVGGFLRSLQFTALNALSYADVEPAEMSRATSFASVAQQVSLSFGVAV 411
               +A + L  G   +L F    ++  +D+ P +++  +  A+  + +  SF  ++
Sbjct: 361 DFQHVALVQLFMGIGVALFFMPTLSILLSDLPPHQIADGSGLATFLRTLGGSFAASL 417