Pairwise Alignments

Query, 271 a.a., Inner membrane ABC transporter permease protein YdcV from Xanthobacter sp. DMC5

Subject, 264 a.a., ABC transporter permease from Pseudomonas simiae WCS417

 Score =  147 bits (371), Expect = 2e-40
 Identities = 77/244 (31%), Positives = 142/244 (58%), Gaps = 7/244 (2%)

Query: 13  IVLGF-----AFLYIPIILLVIYSFNASRLVTV-WAGFSTQWYWSLLENEQLIDAAWVTL 66
           + LGF      F+  P++++ + +F     +++  +GFS +W+ ++ E    I A + +L
Sbjct: 7   LALGFHGVVVLFMMAPLVVVCLVAFTPENTLSLPTSGFSLRWFRAVFERADFIQAFYNSL 66

Query: 67  RIAFFSSLVATVLGTMAALALTRYGRFGGRTLFSGMIYAPLVMPEVITGLSLLLLFVAVN 126
            +AF ++ +AT++   AALA++RY  F GR  FS +  +P+++P ++ G+++L LF  + 
Sbjct: 67  ILAFTAATLATLIAVPAALAISRY-TFPGRNFFSALFLSPIIIPHLVLGVAMLRLFALMG 125

Query: 127 FDRGFWTVLLAHITFTMCFVAVVVQSRLVTFDRTLEEAALDLGCPPFQTFFKITLPLILP 186
            +  F  ++LAH+     +V  +V +  +  DR+ E+AA  LG   F  F +ITLP+ILP
Sbjct: 126 VNGSFTWLMLAHVVIITPYVLRLVLAAAIGIDRSAEQAAESLGASRFTLFRQITLPMILP 185

Query: 187 AVVSGFMLAFTLSLDDLVIASFTTGPGATTLPMRIYSQVRLGVTPEINAVCTILIAIVTV 246
            V  G++LAF  S D++ ++ F + P   TLP+R+Y      + P + AV  ++IA+   
Sbjct: 186 GVAGGWLLAFINSFDEVTLSIFVSSPATQTLPVRMYVYATESIDPMMAAVSALVIALTAA 245

Query: 247 VVIV 250
            +I+
Sbjct: 246 TMIL 249