Pairwise Alignments

Query, 271 a.a., Inner membrane ABC transporter permease protein YdcV from Xanthobacter sp. DMC5

Subject, 268 a.a., putrescine ABC transporter permease PotI from Magnetospirillum magneticum AMB-1

 Score =  300 bits (767), Expect = 3e-86
 Identities = 149/257 (57%), Positives = 199/257 (77%), Gaps = 6/257 (2%)

Query: 11  TSIVLGFAFLYIPIILLVIYSFNASRLVTVWAGFSTQWYWSLLENEQLIDAAWVTLRIAF 70
           T++ L +AFLY+PI LLVIYSFNAS+LVTVW GFST+WY  LL + Q++DAAW++L+IAF
Sbjct: 10  TALALVYAFLYLPIALLVIYSFNASKLVTVWGGFSTKWYGELLHDAQVLDAAWLSLKIAF 69

Query: 71  FSSLVATVLGTMAALALTRYGRFGGRTLFSGMIYAPLVMPEVITGLSLLLLFVAVN---- 126
            ++ +AT LGTMAA+ L R+ RF GR LF+GM+ APLVMPE+ITGL+LLLLFV +     
Sbjct: 70  LNACLATALGTMAAVVLVRFRRFSGRALFTGMVSAPLVMPEIITGLALLLLFVGMENLLG 129

Query: 127 --FDRGFWTVLLAHITFTMCFVAVVVQSRLVTFDRTLEEAALDLGCPPFQTFFKITLPLI 184
               R   T+++AH+TF++ FV VVV+SRL   D +LEEAA+DLG  P   FF ITLP+I
Sbjct: 130 WPDGRSMTTIVIAHVTFSLSFVTVVVRSRLAQMDLSLEEAAMDLGARPLTVFFSITLPII 189

Query: 185 LPAVVSGFMLAFTLSLDDLVIASFTTGPGATTLPMRIYSQVRLGVTPEINAVCTILIAIV 244
            PA+ +G++LAFTLS+DD+VI++F +GPGAT LP+ I+S+VRLGV+PEINA+ TI++A+V
Sbjct: 190 APALAAGWLLAFTLSVDDVVISAFVSGPGATPLPIVIFSKVRLGVSPEINALATIVVALV 249

Query: 245 TVVVIVASIVTKRAENQ 261
            V + VA  V    E Q
Sbjct: 250 GVAIAVAGRVMMTREKQ 266